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The map label for this gene is ybgF [C]

Identifier: 114800143

GI number: 114800143

Start: 137861

End: 138817

Strand: Direct

Name: ybgF [C]

Synonym: HNE_0156

Alternate gene names: 114800143

Gene position: 137861-138817 (Clockwise)

Preceding gene: 114797840

Following gene: 114799417

Centisome position: 3.72

GC content: 66.25

Gene sequence:

>957_bases
ATGCTGAAAGCCTCCCTTACCGGCCTCGCCGCACTAGGAATTCTTGCCACCCCGGCCCTCGCGCAGACGCGCAGCGCGCC
CATCGTGAAGGGCGTCACCACCGGGGCGCTCTCCCAGCAGGTGGATCAGACCCGTCAGCAGACGGCCGATCTGATGCTCG
AGATCAATCGCAATGCTGAGCGGATCAACCAGCTCAGCGGGCGGGTTGAGACCCTCGAATATGAACTCTCACGCACACGT
GATGGCGCCCAGCAGCAGATGCTGGACAATGAAACCCTCGCTCAGCAGAACGCCGATCTGCGCGCGCAGCTTGAAGCGCA
GGCGCGTGCGATCACCGCGCTGCAGATGGTTGTGGGTATTGAGCCGACAGAGACCCTGGACACCGGGGCAGCTTCCGGCC
CGGCGCCTTCGCCCTTTCCCGCCGCTTCCGGCCAGCAGGCAATGGGGCCGGCGCCCAGCGCGCAGCCAGGCTCAAGCGGC
GGACCTTCAGTTCTGACCCCAGCCCCGTCGACCCAGGCCGGCCTGCCGGAAGGGTCGCTGGGAACCATATCTGCCAGCCA
GCTTCCTGGGGAAGCCGGTCCGCTCTTCGCTGTGGCCCGTCAGCGCCTGCTCGCGCTCGACTATGCCGGCGCGCAGGAGG
CGTTCCAGTCCTTCGTCGATCAGTTCGGCAACGATCCGCAGGCGGGTGAAGCCTATTTCTGGCTCGGCGAAACGCTGCAC
CAGCAAAATGCCTATGCCGAGAGCGGCCAGGCCTACACGACGATGATCCGCTCCTTCCCGGATGACGAACGCGCGCCCGA
TGCGCTGGCGCGTCTTGCGCGCTCGATGCGGTTGATCGGGGATACGGCAAAGGCCTGCCAGGCACTCGATACGCTGCCCA
AGCGCTATCCGAATGCCTCCAAGGTGGTCCGTGACCTGGCAGCGGTCGAGCGCACGCGCTCCGGATGCTCGGGCTAG

Upstream 100 bases:

>100_bases
ACGTGATGAAAAGGACAGCCGGGTGCCATAATTTGGCCCCGGCTGTTTCTTTTATTGCCCAGGGCTGCAGTCTGCCCCCT
CGCACCCGGAGATCACCGTC

Downstream 100 bases:

>100_bases
GTCCGCAACAGGCGGCCTTTGAGGCAGCGCTCGGCGCGCTGCCTGATCGGTTGCTGGATACCCCCGTTGGTGTGGCGGTT
TCCGGGGGCAGTGATTCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: L-Pal System YbgF; TPR Repeat-Containing Protein; TPR Repeat Protein; L System Periplasmic Component YbgF; Tetratricopeptide TPR2 Protein

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MLKASLTGLAALGILATPALAQTRSAPIVKGVTTGALSQQVDQTRQQTADLMLEINRNAERINQLSGRVETLEYELSRTR
DGAQQQMLDNETLAQQNADLRAQLEAQARAITALQMVVGIEPTETLDTGAASGPAPSPFPAASGQQAMGPAPSAQPGSSG
GPSVLTPAPSTQAGLPEGSLGTISASQLPGEAGPLFAVARQRLLALDYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLH
QQNAYAESGQAYTTMIRSFPDDERAPDALARLARSMRLIGDTAKACQALDTLPKRYPNASKVVRDLAAVERTRSGCSG

Sequences:

>Translated_318_residues
MLKASLTGLAALGILATPALAQTRSAPIVKGVTTGALSQQVDQTRQQTADLMLEINRNAERINQLSGRVETLEYELSRTR
DGAQQQMLDNETLAQQNADLRAQLEAQARAITALQMVVGIEPTETLDTGAASGPAPSPFPAASGQQAMGPAPSAQPGSSG
GPSVLTPAPSTQAGLPEGSLGTISASQLPGEAGPLFAVARQRLLALDYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLH
QQNAYAESGQAYTTMIRSFPDDERAPDALARLARSMRLIGDTAKACQALDTLPKRYPNASKVVRDLAAVERTRSGCSG
>Mature_318_residues
MLKASLTGLAALGILATPALAQTRSAPIVKGVTTGALSQQVDQTRQQTADLMLEINRNAERINQLSGRVETLEYELSRTR
DGAQQQMLDNETLAQQNADLRAQLEAQARAITALQMVVGIEPTETLDTGAASGPAPSPFPAASGQQAMGPAPSAQPGSSG
GPSVLTPAPSTQAGLPEGSLGTISASQLPGEAGPLFAVARQRLLALDYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLH
QQNAYAESGQAYTTMIRSFPDDERAPDALARLARSMRLIGDTAKACQALDTLPKRYPNASKVVRDLAAVERTRSGCSG

Specific function: Unknown

COG id: COG1729

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33379; Mature: 33379

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKASLTGLAALGILATPALAQTRSAPIVKGVTTGALSQQVDQTRQQTADLMLEINRNAE
CCCCHHHHHHHHHHHHCCHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RINQLSGRVETLEYELSRTRDGAQQQMLDNETLAQQNADLRAQLEAQARAITALQMVVGI
HHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
EPTETLDTGAASGPAPSPFPAASGQQAMGPAPSAQPGSSGGPSVLTPAPSTQAGLPEGSL
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
GTISASQLPGEAGPLFAVARQRLLALDYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLH
CCCCHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
QQNAYAESGQAYTTMIRSFPDDERAPDALARLARSMRLIGDTAKACQALDTLPKRYPNAS
HHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KVVRDLAAVERTRSGCSG
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLKASLTGLAALGILATPALAQTRSAPIVKGVTTGALSQQVDQTRQQTADLMLEINRNAE
CCCCHHHHHHHHHHHHCCHHHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHH
RINQLSGRVETLEYELSRTRDGAQQQMLDNETLAQQNADLRAQLEAQARAITALQMVVGI
HHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCC
EPTETLDTGAASGPAPSPFPAASGQQAMGPAPSAQPGSSGGPSVLTPAPSTQAGLPEGSL
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCC
GTISASQLPGEAGPLFAVARQRLLALDYAGAQEAFQSFVDQFGNDPQAGEAYFWLGETLH
CCCCHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEHHHHHHH
QQNAYAESGQAYTTMIRSFPDDERAPDALARLARSMRLIGDTAKACQALDTLPKRYPNAS
HHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
KVVRDLAAVERTRSGCSG
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA