| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114797525
Identifier: 114797525
GI number: 114797525
Start: 956688
End: 957089
Strand: Reverse
Name: 114797525
Synonym: HNE_0941
Alternate gene names: NA
Gene position: 957089-956688 (Counterclockwise)
Preceding gene: 114799775
Following gene: 114798538
Centisome position: 25.83
GC content: 63.93
Gene sequence:
>402_bases ATGCCGCTAACAGAAATTCTTGCGATTACAGGGCTCGGCTTCGGCGCCGCGTTAGGTCTGGGCGCGCTGATTGCGCCCGA ATGGGCCTCGGGCGTGGTGCGCCTCAAGGCAGATCCTGCCAAAGGCGGGGGATATTCGGAATTCCGTGCCACTTATGGCG GCCTGCTGCTGATGGTTCACGGCGCCGCGCTGGTGATCGTCGTAATAACGCCGCCTGCGGGCTCAACGCTGGTTGTGCTG CCCATCGCGGCGGGCTGGTTTGGCGCTGCCATCGGGCGGGCGGTTGCGCTCGTTTTTGACCGCGCCAAGCTCGGCGACAC GCGGATAATTCCCATCTGGATGGCGACTGAGGTGGCCCTTGGCCTTGCTATTGGCGCGCCAGTCCTGCAATTCCTCGGCT GA
Upstream 100 bases:
>100_bases GAAATTCAGAGATTCCCTGCAGTTGTAATGTTGGCGGGAACAGGCTGGGCAATCGCCCGCCGCGCCCTATCCTGATGGAT CAGAGGAGCCCGGAAACGCC
Downstream 100 bases:
>100_bases AACAAGTCACAGAAAGACATTGCCATGACGGAGCGTCGCGAGACGGGCCGCCCAGCCCGAAAGCCTTCCAGCCCCAAACG GGCACCTGGCCCCAAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 133; Mature: 132
Protein sequence:
>133_residues MPLTEILAITGLGFGAALGLGALIAPEWASGVVRLKADPAKGGGYSEFRATYGGLLLMVHGAALVIVVITPPAGSTLVVL PIAAGWFGAAIGRAVALVFDRAKLGDTRIIPIWMATEVALGLAIGAPVLQFLG
Sequences:
>Translated_133_residues MPLTEILAITGLGFGAALGLGALIAPEWASGVVRLKADPAKGGGYSEFRATYGGLLLMVHGAALVIVVITPPAGSTLVVL PIAAGWFGAAIGRAVALVFDRAKLGDTRIIPIWMATEVALGLAIGAPVLQFLG >Mature_132_residues PLTEILAITGLGFGAALGLGALIAPEWASGVVRLKADPAKGGGYSEFRATYGGLLLMVHGAALVIVVITPPAGSTLVVLP IAAGWFGAAIGRAVALVFDRAKLGDTRIIPIWMATEVALGLAIGAPVLQFLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13431; Mature: 13300
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLTEILAITGLGFGAALGLGALIAPEWASGVVRLKADPAKGGGYSEFRATYGGLLLMVH CCHHHHHHHHCCCHHHHHHHCHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEE GAALVIVVITPPAGSTLVVLPIAAGWFGAAIGRAVALVFDRAKLGDTRIIPIWMATEVAL CCEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHH GLAIGAPVLQFLG HHHHHHHHHHHCC >Mature Secondary Structure PLTEILAITGLGFGAALGLGALIAPEWASGVVRLKADPAKGGGYSEFRATYGGLLLMVH CHHHHHHHHCCCHHHHHHHCHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHEEEE GAALVIVVITPPAGSTLVVLPIAAGWFGAAIGRAVALVFDRAKLGDTRIIPIWMATEVAL CCEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHH GLAIGAPVLQFLG HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA