| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is iutA [H]
Identifier: 114797488
GI number: 114797488
Start: 1059013
End: 1061328
Strand: Reverse
Name: iutA [H]
Synonym: HNE_1051
Alternate gene names: 114797488
Gene position: 1061328-1059013 (Counterclockwise)
Preceding gene: 114798440
Following gene: 114798455
Centisome position: 28.65
GC content: 62.31
Gene sequence:
>2316_bases ATGCCGGACTGGCGGGCGCGAGCGTTGGCAGGGCGCGGCTGCGGCTGGCCGTCGATGTGTCCTCGCGGTCACGCCGGCCT GCGATGTGCTGCAACTACGCCAAAAGTATTTGCAAATGATTTTCATTATCGCGTATGGCAGTCCCGTTTTGAACAGTCAG TCCATATCCAGGAGCCGCCCATGAAGAACTTGTATGGCATCAGTGCCGCCGCCCTGCTGGCGATGTCCGCACCGGCCCAT GCGCAGGAAAACAGCGCGGAGCCTGCAGACGATACCCGGATCGAGGAGACAGTCGTCGTCACTGCCACCCGGTCCAGCCT GCCCCCGTCGGCCCTGCCCAACACCATCCAGCTTATCCAGAACGACGCCCTGTCCCTGCAAGCCCAGCTGACCGGATCGG CCATCGAAGTCGTCTCGACCCTCGTGCCGTCTTTCTCGCCCACACGCGAAAAACTCTCGGGCGCCGGCGAGACGCTGCGC GGCCGCAGCCCGCTCTACCTGATTGATGGCGTGCCCCAGTCAAACCCGCTGCGCGATGGCAGCCGCGACGGCTACACTAT TGATCCCTTCTTCATTGAGCGGGTCGAGGTGATCTTCGGTTCCAACGCCATCCAGGGCATCGGCGCCACCGGCGGCGTCG TGAACTACGTCACAGCCGCAGCCCCGGAAGAAGGCGAAGGCTGGACCGGCAAGCTGCTGGCACAGATCGGCGCAGGCTCC GGCTTCAAGGGCGACGGGTACGACTATCGGGGCGGCGCCCTGGCTGGCCGCGATTTCGGCGCGCTGGACCTGACCCTCGG CGTGGCTACCCAGAAGCGCGGCGCCTTCTACAGCGGCAACGGCCGGCGCATCGGCATCGACGGCGCTCAGGGCGAAGTGC AGGATTCCGACAGCCTGTCTTTCTTCGGCAAGGCTGGTTTTGACCTTAGTCCAACCCGCCGGCTGGAGCTGATGGCCCAG CGGTTTGAGCTTGAGGGCGACGGCGACTATGTCCTCGTCAACGGCTCCCGCGCCACGGATACACCCACCACCACCATCCG CGGCGACCAGCCCGGCGTCATCCCCACCAACACGGTTCTCACCACCTCGCTGACCTATACCGATGAAGACCTGCTGGGCG GCACGCTGACCAGCCAGGCCTTTTATCAGGACTTCGAATCCGTTTTCGGCGGCGGCAGCTTCGCCACCTTCCAGGACCCG GCCATTGCACCTGTGGGCACGCTGTTTGATCAGTCATCGAACAATTCAGAGAAAATGGGCGTGCGCATTTCGTATGAACG CACACTGGACGCTGTGCCCGGTCTGAACGTGCGCGGCGGGCTCGATGCCCTCAACGACCAGACCTATCAGGAGCTGATCG TGACGGGCCGCAACTGGGTGCCGGAAACCGAGTTCACCTCCTTTGCCCCCTTCCTGCAACTCAACCAGGCCCTCTTCGGC GAGCGTGTGTACATCTCGGGCGGCCTGCGCCACGAGATGGCGAAGCTGAAGGTCGACGATTTTGAAACGCTGTATGCCTA TGGCCCACAGCAGGTCGAAGGCGGTGAACCGGAGTTTGAGAAAACCCTGTTCAATGTCGGCGCCACGGCGGAAATCGTTG ACGGCCTCACCGTCTACACCTCCTATGCACAGGGCTTCACTATGGCCGATGTAGGCCGCATCCTGCGGGCCGTCAGCACC CCTGACCAGGATGTGGACACCTTCCTCAACATCGAGCCTGTCGTCTCCGACAATACCGAAATCGGCCTGGAATGGCGCCA GGGTCCGCTCTCGGCTTCAGCTGCCTATTTCTGGAGCACATCGGATCTCGGCGCGCTGCTGGTATTGCGCAATGATGTCT TTGAAGTGGAACGTCAGCGCACGGAAATTGACGGCATGGAACTGACCGGCGCGTGGGATACGCCCGTTACCGGGCTGAAG CTCTCCGGCGGGGTTGCCGTGCTTAACGGGCGCACCGACAGCGATGGCGACGACAAGGTGGATATTGACCTCGACGGCGC CAATATCAGCCCCGACCGCGTCAACCTTGCCGCTGACTATGAAACCGGCCCGTTCACCCTGCGCGTCCAGGCACGGTCTT ATCTTGATCGCGCCTTCGAAGGCCTGCCGCTGAACACAGACTTTGACGGCCACACCCTCGCCGATGCCTTCCTGCGCTAC TCGGCCGGGTTTGGAGACATCACCCTCTCCGCGTCAAACCTCTTTGACAAACAGTATGTCACCTATGACAGCCAGACCGT TCAGCCGACCAGCAATACGCGGTATTTTGCAGGCCGTGGCCGGATGATCACCCTCGCCTTCGAGAAATCCTTTTGA
Upstream 100 bases:
>100_bases GCTTGTCGCCCACTTTGATCGCCATGGCAGTTTTCTCCTTGCTTGCTCCTGCGGAGATAGGCCGCTCTTGCCTCGCCCGC AATGCTTTCCCCGAAGACGG
Downstream 100 bases:
>100_bases GGCTGATGCTGCTCCTGAGGACAGCGCATGCCTGGGCGGGCGCTGTCCTCTCCTTCCTGATTGCCGTGCTGGGCCTTTCC GGGGCGCTTCTGGTGTTCAG
Product: TonB dependent receptor
Products: NA
Alternate protein names: Cloacin receptor [H]
Number of amino acids: Translated: 771; Mature: 770
Protein sequence:
>771_residues MPDWRARALAGRGCGWPSMCPRGHAGLRCAATTPKVFANDFHYRVWQSRFEQSVHIQEPPMKNLYGISAAALLAMSAPAH AQENSAEPADDTRIEETVVVTATRSSLPPSALPNTIQLIQNDALSLQAQLTGSAIEVVSTLVPSFSPTREKLSGAGETLR GRSPLYLIDGVPQSNPLRDGSRDGYTIDPFFIERVEVIFGSNAIQGIGATGGVVNYVTAAAPEEGEGWTGKLLAQIGAGS GFKGDGYDYRGGALAGRDFGALDLTLGVATQKRGAFYSGNGRRIGIDGAQGEVQDSDSLSFFGKAGFDLSPTRRLELMAQ RFELEGDGDYVLVNGSRATDTPTTTIRGDQPGVIPTNTVLTTSLTYTDEDLLGGTLTSQAFYQDFESVFGGGSFATFQDP AIAPVGTLFDQSSNNSEKMGVRISYERTLDAVPGLNVRGGLDALNDQTYQELIVTGRNWVPETEFTSFAPFLQLNQALFG ERVYISGGLRHEMAKLKVDDFETLYAYGPQQVEGGEPEFEKTLFNVGATAEIVDGLTVYTSYAQGFTMADVGRILRAVST PDQDVDTFLNIEPVVSDNTEIGLEWRQGPLSASAAYFWSTSDLGALLVLRNDVFEVERQRTEIDGMELTGAWDTPVTGLK LSGGVAVLNGRTDSDGDDKVDIDLDGANISPDRVNLAADYETGPFTLRVQARSYLDRAFEGLPLNTDFDGHTLADAFLRY SAGFGDITLSASNLFDKQYVTYDSQTVQPTSNTRYFAGRGRMITLAFEKSF
Sequences:
>Translated_771_residues MPDWRARALAGRGCGWPSMCPRGHAGLRCAATTPKVFANDFHYRVWQSRFEQSVHIQEPPMKNLYGISAAALLAMSAPAH AQENSAEPADDTRIEETVVVTATRSSLPPSALPNTIQLIQNDALSLQAQLTGSAIEVVSTLVPSFSPTREKLSGAGETLR GRSPLYLIDGVPQSNPLRDGSRDGYTIDPFFIERVEVIFGSNAIQGIGATGGVVNYVTAAAPEEGEGWTGKLLAQIGAGS GFKGDGYDYRGGALAGRDFGALDLTLGVATQKRGAFYSGNGRRIGIDGAQGEVQDSDSLSFFGKAGFDLSPTRRLELMAQ RFELEGDGDYVLVNGSRATDTPTTTIRGDQPGVIPTNTVLTTSLTYTDEDLLGGTLTSQAFYQDFESVFGGGSFATFQDP AIAPVGTLFDQSSNNSEKMGVRISYERTLDAVPGLNVRGGLDALNDQTYQELIVTGRNWVPETEFTSFAPFLQLNQALFG ERVYISGGLRHEMAKLKVDDFETLYAYGPQQVEGGEPEFEKTLFNVGATAEIVDGLTVYTSYAQGFTMADVGRILRAVST PDQDVDTFLNIEPVVSDNTEIGLEWRQGPLSASAAYFWSTSDLGALLVLRNDVFEVERQRTEIDGMELTGAWDTPVTGLK LSGGVAVLNGRTDSDGDDKVDIDLDGANISPDRVNLAADYETGPFTLRVQARSYLDRAFEGLPLNTDFDGHTLADAFLRY SAGFGDITLSASNLFDKQYVTYDSQTVQPTSNTRYFAGRGRMITLAFEKSF >Mature_770_residues PDWRARALAGRGCGWPSMCPRGHAGLRCAATTPKVFANDFHYRVWQSRFEQSVHIQEPPMKNLYGISAAALLAMSAPAHA QENSAEPADDTRIEETVVVTATRSSLPPSALPNTIQLIQNDALSLQAQLTGSAIEVVSTLVPSFSPTREKLSGAGETLRG RSPLYLIDGVPQSNPLRDGSRDGYTIDPFFIERVEVIFGSNAIQGIGATGGVVNYVTAAAPEEGEGWTGKLLAQIGAGSG FKGDGYDYRGGALAGRDFGALDLTLGVATQKRGAFYSGNGRRIGIDGAQGEVQDSDSLSFFGKAGFDLSPTRRLELMAQR FELEGDGDYVLVNGSRATDTPTTTIRGDQPGVIPTNTVLTTSLTYTDEDLLGGTLTSQAFYQDFESVFGGGSFATFQDPA IAPVGTLFDQSSNNSEKMGVRISYERTLDAVPGLNVRGGLDALNDQTYQELIVTGRNWVPETEFTSFAPFLQLNQALFGE RVYISGGLRHEMAKLKVDDFETLYAYGPQQVEGGEPEFEKTLFNVGATAEIVDGLTVYTSYAQGFTMADVGRILRAVSTP DQDVDTFLNIEPVVSDNTEIGLEWRQGPLSASAAYFWSTSDLGALLVLRNDVFEVERQRTEIDGMELTGAWDTPVTGLKL SGGVAVLNGRTDSDGDDKVDIDLDGANISPDRVNLAADYETGPFTLRVQARSYLDRAFEGLPLNTDFDGHTLADAFLRYS AGFGDITLSASNLFDKQYVTYDSQTVQPTSNTRYFAGRGRMITLAFEKSF
Specific function: Receptor for cloacin DF13/aerobactin [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 83250; Mature: 83119
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDWRARALAGRGCGWPSMCPRGHAGLRCAATTPKVFANDFHYRVWQSRFEQSVHIQEPP CCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHCCCCCCCCC MKNLYGISAAALLAMSAPAHAQENSAEPADDTRIEETVVVTATRSSLPPSALPNTIQLIQ CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHH NDALSLQAQLTGSAIEVVSTLVPSFSPTREKLSGAGETLRGRSPLYLIDGVPQSNPLRDG CCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC SRDGYTIDPFFIERVEVIFGSNAIQGIGATGGVVNYVTAAAPEEGEGWTGKLLAQIGAGS CCCCEEECHHHHHHHHEEECCCCCCCCCCCCCHHHHHEECCCCCCCCCHHHHHHHHCCCC GFKGDGYDYRGGALAGRDFGALDLTLGVATQKRGAFYSGNGRRIGIDGAQGEVQDSDSLS CCCCCCCCCCCCEECCCCCCEEEEEEEEEECCCCCEECCCCCEEECCCCCCCCCCCCCEE FFGKAGFDLSPTRRLELMAQRFELEGDGDYVLVNGSRATDTPTTTIRGDQPGVIPTNTVL EEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCEE TTSLTYTDEDLLGGTLTSQAFYQDFESVFGGGSFATFQDPAIAPVGTLFDQSSNNSEKMG EEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCCEE VRISYERTLDAVPGLNVRGGLDALNDQTYQELIVTGRNWVPETEFTSFAPFLQLNQALFG EEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC ERVYISGGLRHEMAKLKVDDFETLYAYGPQQVEGGEPEFEKTLFNVGATAEIVDGLTVYT CEEEEECCCHHHHHHEECCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHCCEEEEE SYAQGFTMADVGRILRAVSTPDQDVDTFLNIEPVVSDNTEIGLEWRQGPLSASAAYFWST HHHCCCCHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCEEEEEECCCCCCCCEEEEEEC SDLGALLVLRNDVFEVERQRTEIDGMELTGAWDTPVTGLKLSGGVAVLNGRTDSDGDDKV CCCCEEEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCEEEEECCCCCCCCCEE DIDLDGANISPDRVNLAADYETGPFTLRVQARSYLDRAFEGLPLNTDFDGHTLADAFLRY EEEECCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH SAGFGDITLSASNLFDKQYVTYDSQTVQPTSNTRYFAGRGRMITLAFEKSF CCCCCCEEEEHHHCCCCEEEEECCCEECCCCCCEEEECCCCEEEEEEECCC >Mature Secondary Structure PDWRARALAGRGCGWPSMCPRGHAGLRCAATTPKVFANDFHYRVWQSRFEQSVHIQEPP CCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCHHHHCCHHHHHHHHHHHCCCCCCCCC MKNLYGISAAALLAMSAPAHAQENSAEPADDTRIEETVVVTATRSSLPPSALPNTIQLIQ CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHHH NDALSLQAQLTGSAIEVVSTLVPSFSPTREKLSGAGETLRGRSPLYLIDGVPQSNPLRDG CCCEEEEEEECCHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCC SRDGYTIDPFFIERVEVIFGSNAIQGIGATGGVVNYVTAAAPEEGEGWTGKLLAQIGAGS CCCCEEECHHHHHHHHEEECCCCCCCCCCCCCHHHHHEECCCCCCCCCHHHHHHHHCCCC GFKGDGYDYRGGALAGRDFGALDLTLGVATQKRGAFYSGNGRRIGIDGAQGEVQDSDSLS CCCCCCCCCCCCEECCCCCCEEEEEEEEEECCCCCEECCCCCEEECCCCCCCCCCCCCEE FFGKAGFDLSPTRRLELMAQRFELEGDGDYVLVNGSRATDTPTTTIRGDQPGVIPTNTVL EEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEECCCCCCCCCCCCEE TTSLTYTDEDLLGGTLTSQAFYQDFESVFGGGSFATFQDPAIAPVGTLFDQSSNNSEKMG EEEEEECCHHHCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCCEE VRISYERTLDAVPGLNVRGGLDALNDQTYQELIVTGRNWVPETEFTSFAPFLQLNQALFG EEEEHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC ERVYISGGLRHEMAKLKVDDFETLYAYGPQQVEGGEPEFEKTLFNVGATAEIVDGLTVYT CEEEEECCCHHHHHHEECCCCHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHCCEEEEE SYAQGFTMADVGRILRAVSTPDQDVDTFLNIEPVVSDNTEIGLEWRQGPLSASAAYFWST HHHCCCCHHHHHHHHHHHCCCCCCHHHHEEEEEEECCCCEEEEEECCCCCCCCEEEEEEC SDLGALLVLRNDVFEVERQRTEIDGMELTGAWDTPVTGLKLSGGVAVLNGRTDSDGDDKV CCCCEEEEEECHHHHHHHHHHHCCCEEEECCCCCCCCCEEECCCEEEEECCCCCCCCCEE DIDLDGANISPDRVNLAADYETGPFTLRVQARSYLDRAFEGLPLNTDFDGHTLADAFLRY EEEECCCCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH SAGFGDITLSASNLFDKQYVTYDSQTVQPTSNTRYFAGRGRMITLAFEKSF CCCCCCEEEEHHHCCCCEEEEECCCEECCCCCCEEEECCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA