Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798440

Identifier: 114798440

GI number: 114798440

Start: 1063614

End: 1064480

Strand: Reverse

Name: 114798440

Synonym: HNE_1055

Alternate gene names: NA

Gene position: 1064480-1063614 (Counterclockwise)

Preceding gene: 114797915

Following gene: 114797488

Centisome position: 28.73

GC content: 70.59

Gene sequence:

>867_bases
GTGAGGGCTGAAACGCACGCCCTATCCCCCATCCCAACCCCCAAAAACCCCAACCCAATCAGCCCCCTCCCAAAAAAACA
CCCCCAACTTATCCACCCCCTCGCGGCCCATGGCATTCTCTACGCCATGGATACCGCCCCTCAGCCCACGGATGACACCG
AAGCGCTCGACGAGCTCGACACCCTGCTCGAGCGCGCGCGTCTCTTCATCCTGGATCTGATGATCTTCGTCGATGGCATC
TTCGAACGCCTCGGCAGCGTGCCGCTGAGCGCCAAGCTCGCCCGCCGCCTCACCCGCCACGCCCTTCTCCCGGCTGAAAC
CGCCCTGCGCCGCGCCATCCTCATTCTCGCCGCAGGCCTGCCCATGCCGGTCCTGCGCGCACCCCGCGCCGCGCCGGACA
CGGCACCCCCGCGGGCCAGCACCGTCTCTCCCCAAGCCACTAAGCCCCGCCCACCCGCCTTCCGCATGAGCGAGCCCCCG
CCGCGCGCCCGGAACGACGACACCACCCGTCCGGACACGGCCTATCTCCCCGAAGACCAGCTCCCGCGCATCCTCGCGCT
GACAGACGCCGTGCTCTACGCCCCGCCGGCGCCGCCAAAACCGCTCCCCGGCCCCCGCGACCCCACCGCCATCTTCTGCC
GCCGCTACGCCGCCCTGCAAGCCGCCTTCCACGACGCACAGGGAGAAGCCCGCCGCTGGGCCCGCCGCCGCGCCCGCGCC
ATGGCCCGCGCCGGCGCCGGCACCCGCGCCCTCCCCCTCCCGCTGGCACTTCCCCGCCCGCGAAAATCCGCCAAACCCAC
CGAAACCAATCTCCTCCGTGACCTGACAGACTCCACCAACACCTGCTTCGGCCACAACACCTCCTGA

Upstream 100 bases:

>100_bases
TCAGAGACAAATCCCCATGGCAAACACAAAACGCTTGAAAGCGAACACAGTCGCTCTCCCGCTTGCGGGAGAGGAGGGGC
CCATTGCGGCGCAATGGGAG

Downstream 100 bases:

>100_bases
CGGCGGCCCGATCCGCCCTCCCCACCTCCCCCGCACCGCTGGGGAGGATAAGGGCGTTGCCCCAAACAAAAACCCCTCCG
TCACCGGAGGGGTTTCTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELDTLLERARLFILDLMIFVDGI
FERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGLPMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPP
PRARNDDTTRPDTAYLPEDQLPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA
MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS

Sequences:

>Translated_288_residues
MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELDTLLERARLFILDLMIFVDGI
FERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGLPMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPP
PRARNDDTTRPDTAYLPEDQLPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA
MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS
>Mature_288_residues
MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELDTLLERARLFILDLMIFVDGI
FERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGLPMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPP
PRARNDDTTRPDTAYLPEDQLPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA
MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31480; Mature: 31480

Theoretical pI: Translated: 11.08; Mature: 11.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHH
TLLERARLFILDLMIFVDGIFERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPPPRARNDDTTRPDTAYLPEDQ
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
LPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA
CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRAETHALSPIPTPKNPNPISPLPKKHPQLIHPLAAHGILYAMDTAPQPTDDTEALDELD
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCHHHHHHHHH
TLLERARLFILDLMIFVDGIFERLGSVPLSAKLARRLTRHALLPAETALRRAILILAAGL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PMPVLRAPRAAPDTAPPRASTVSPQATKPRPPAFRMSEPPPRARNDDTTRPDTAYLPEDQ
CHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
LPRILALTDAVLYAPPAPPKPLPGPRDPTAIFCRRYAALQAAFHDAQGEARRWARRRARA
CCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
MARAGAGTRALPLPLALPRPRKSAKPTETNLLRDLTDSTNTCFGHNTS
HHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA