| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798455
Identifier: 114798455
GI number: 114798455
Start: 1057937
End: 1059007
Strand: Reverse
Name: 114798455
Synonym: HNE_1050
Alternate gene names: NA
Gene position: 1059007-1057937 (Counterclockwise)
Preceding gene: 114797488
Following gene: 114797613
Centisome position: 28.58
GC content: 66.85
Gene sequence:
>1071_bases ATGCTGCTCCTGAGGACAGCGCATGCCTGGGCGGGCGCTGTCCTCTCCTTCCTGATTGCCGTGCTGGGCCTTTCCGGGGC GCTTCTGGTGTTCAGGAAGGATTATCTACGGCTGGTGTTTCCTCAGGCGCGCGAGGGTGTCTCGCTCGCCCCCGAAACAC TTGGCCCGGTGATCGGCCGCATCGATGCGGAACACACGTCCCAGGGCCTGCAATACATCTCTCTGGCCGGGCCGGATTTC GGCCTGCACAAGGCCGTCTTCAAGGATGGCGGCGGCGCCTATCTCGACGCGCAGGGAAACACGCTGGCGCGCTGGGCCAA GAACGGCCGGCCGGAAGACTGGCTGTTTGACCTGCACCACTATCTGCTGGCGGGAGATACCGGAAAGCTGATCGCGGGCG TCGCCGGGGGCGCGGCCATTCTGCTCTGCCTCACAGGGCTCATCATAGTGTGGCCAAGCCTGCGGATGTTCGCCTGGCGC GTCTGGCCCAAAACAGCGATGCGCCGCGACCTGCTGGCCCAGCACCGCGACCTGGGCGTGATCTTCGCCCTGCCGATCCT GCTGATTGTGTTCACAGGATTCTCGATGGTCTATTCCGGGCCGGTGCGCGCCACGCTCAACGTGCTGACCGCTTCGCGGC CTGCGCCGCCACCCGAGCGGCCCCTGGCCGGCGCGGGAACCACAGACTGGACGCAGGTGCTCACTGTCGCCGCAGAGCGT TTTCCGGGCGCCATCCCGCGCCTTGCCAGCCCGCCACGCAGCGAAGGCGCCCCGGCCTCCCTGCGCCTGCGCCAGCCCGC AGAATGGCACCAGAACGGGCGTACCTATGTTTTCATGGACCCCGCCACGAACCTGCCCACCGGCACCTCTGACGGCATGT CCGCCACCCGCGCGGACCGGATTTTCAATGCCCTCTACCCCCTCCACTCGGCCGGTATCGGCGGGCGCCTCTATGATCTG CTGTCGCTGTTCACGGGCCTCGCCCTCACGATTCTGGGGCTGGCGGGCACATGGACCTTCCTGCGCAAGCCAAGGCGCAA AAAGAGGAAGCGCGCTGTAACCGCCGCCTGA
Upstream 100 bases:
>100_bases CCTATGACAGCCAGACCGTTCAGCCGACCAGCAATACGCGGTATTTTGCAGGCCGTGGCCGGATGATCACCCTCGCCTTC GAGAAATCCTTTTGAGGCTG
Downstream 100 bases:
>100_bases AATGCTCCGATTTTCACTTGCAAATGCCGCGCGCCTGCCCCAGCCTTGGCCCCCGGAGCACGAGATGCAGATTGAAACGG ACCTCACCGGCAAGCTGCTG
Product: PepSY-associated TM helix domain-containing protein
Products: sulfite; NADPH; H+
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; Iron-Uptake Factor; PepSY-Associated TM Helix Family Protein; PepSY-Associated TM Helix Domain Protein
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MLLLRTAHAWAGAVLSFLIAVLGLSGALLVFRKDYLRLVFPQAREGVSLAPETLGPVIGRIDAEHTSQGLQYISLAGPDF GLHKAVFKDGGGAYLDAQGNTLARWAKNGRPEDWLFDLHHYLLAGDTGKLIAGVAGGAAILLCLTGLIIVWPSLRMFAWR VWPKTAMRRDLLAQHRDLGVIFALPILLIVFTGFSMVYSGPVRATLNVLTASRPAPPPERPLAGAGTTDWTQVLTVAAER FPGAIPRLASPPRSEGAPASLRLRQPAEWHQNGRTYVFMDPATNLPTGTSDGMSATRADRIFNALYPLHSAGIGGRLYDL LSLFTGLALTILGLAGTWTFLRKPRRKKRKRAVTAA
Sequences:
>Translated_356_residues MLLLRTAHAWAGAVLSFLIAVLGLSGALLVFRKDYLRLVFPQAREGVSLAPETLGPVIGRIDAEHTSQGLQYISLAGPDF GLHKAVFKDGGGAYLDAQGNTLARWAKNGRPEDWLFDLHHYLLAGDTGKLIAGVAGGAAILLCLTGLIIVWPSLRMFAWR VWPKTAMRRDLLAQHRDLGVIFALPILLIVFTGFSMVYSGPVRATLNVLTASRPAPPPERPLAGAGTTDWTQVLTVAAER FPGAIPRLASPPRSEGAPASLRLRQPAEWHQNGRTYVFMDPATNLPTGTSDGMSATRADRIFNALYPLHSAGIGGRLYDL LSLFTGLALTILGLAGTWTFLRKPRRKKRKRAVTAA >Mature_356_residues MLLLRTAHAWAGAVLSFLIAVLGLSGALLVFRKDYLRLVFPQAREGVSLAPETLGPVIGRIDAEHTSQGLQYISLAGPDF GLHKAVFKDGGGAYLDAQGNTLARWAKNGRPEDWLFDLHHYLLAGDTGKLIAGVAGGAAILLCLTGLIIVWPSLRMFAWR VWPKTAMRRDLLAQHRDLGVIFALPILLIVFTGFSMVYSGPVRATLNVLTASRPAPPPERPLAGAGTTDWTQVLTVAAER FPGAIPRLASPPRSEGAPASLRLRQPAEWHQNGRTYVFMDPATNLPTGTSDGMSATRADRIFNALYPLHSAGIGGRLYDL LSLFTGLALTILGLAGTWTFLRKPRRKKRKRAVTAA
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.1.2
Molecular weight: Translated: 38527; Mature: 38527
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLRTAHAWAGAVLSFLIAVLGLSGALLVFRKDYLRLVFPQAREGVSLAPETLGPVIGR CEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHC IDAEHTSQGLQYISLAGPDFGLHKAVFKDGGGAYLDAQGNTLARWAKNGRPEDWLFDLHH CCHHHHHCCCEEEEECCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHH YLLAGDTGKLIAGVAGGAAILLCLTGLIIVWPSLRMFAWRVWPKTAMRRDLLAQHRDLGV HHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHH IFALPILLIVFTGFSMVYSGPVRATLNVLTASRPAPPPERPLAGAGTTDWTQVLTVAAER HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FPGAIPRLASPPRSEGAPASLRLRQPAEWHQNGRTYVFMDPATNLPTGTSDGMSATRADR CCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH IFNALYPLHSAGIGGRLYDLLSLFTGLALTILGLAGTWTFLRKPRRKKRKRAVTAA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCC >Mature Secondary Structure MLLLRTAHAWAGAVLSFLIAVLGLSGALLVFRKDYLRLVFPQAREGVSLAPETLGPVIGR CEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHC IDAEHTSQGLQYISLAGPDFGLHKAVFKDGGGAYLDAQGNTLARWAKNGRPEDWLFDLHH CCHHHHHCCCEEEEECCCCCCHHHHHHCCCCCEEEECCCCHHHHHHHCCCCHHHHHHHHH YLLAGDTGKLIAGVAGGAAILLCLTGLIIVWPSLRMFAWRVWPKTAMRRDLLAQHRDLGV HHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHH IFALPILLIVFTGFSMVYSGPVRATLNVLTASRPAPPPERPLAGAGTTDWTQVLTVAAER HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FPGAIPRLASPPRSEGAPASLRLRQPAEWHQNGRTYVFMDPATNLPTGTSDGMSATRADR CCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHHHH IFNALYPLHSAGIGGRLYDLLSLFTGLALTILGLAGTWTFLRKPRRKKRKRAVTAA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: hydrogen sulfide; NADP+; H2O
Specific reaction: hydrogen sulfide + 3 NADP+ + 3 H2O = sulfite + 3 NADPH + 3 H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA