| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797205
Identifier: 114797205
GI number: 114797205
Start: 2253044
End: 2254348
Strand: Direct
Name: 114797205
Synonym: HNE_2167
Alternate gene names: NA
Gene position: 2253044-2254348 (Clockwise)
Preceding gene: 114797768
Following gene: 114798176
Centisome position: 60.81
GC content: 62.22
Gene sequence:
>1305_bases ATGTTCACACGCGCCCTCGCCACAGTTGCAACGGCCTTCATGATCGCCGGCGGCGCTGCGTCAGCTGAAACGGTTTACCT CACGGCTGGGCATTTTGTTGACCCCGTTTCCGGCGAAACCGTGCGGGACGCCGCTTTCGTGATCGAAGACGGGGCGGTGA CAGGGCGCGGAACGAAGTCCAGCCTCAAGGCACCGCGCGGGGCAAAAACGGTGGATCTGGGCGCGGCGTATCTGATGCCG GGCTTCATCGACATGCACGTCCACCTGACCAGCGACGCGGAAGACGGGCCCTATTATTCCCTCAGCCTCTCGGATGAGCG CATGGCCATCAAGGGTGTGAAGAACGCTCGTAAGACGCTGCTGGCGGGCTTCACAACCGTTCGTAATCTGGGCGCCGAAA GCTATGGGGATGTGGCCCTGCGCGAGGCGATTGATGCGGGTGAAGTGCCTGGGCCACGTTTGCTCGTCTCTGGCCCGCCG GTTGGGATTTCGGGAGGGCACTGCTCGGATACGAACCTTCTGCCTTCCGAGTATCGCCTGAAGGGTGAAGGCGTTGCCAA CGGCCCCTGGGAAATGCGCGCCAAGGTTCGCGAGAACATCAAATATGGCGTTGATCTCATCAAGACGTGCTCAACGGGCG GCGTCCTCTCCAAAGGCACGGCCCTGGGCGCGGCCCAAGGCACGATCGAGGAAATCGAGGCTATCGTGGAAGAAGCACAT GCCCGCGGATTGAAAGTGGCCAGCCATGCCCACGGCACCGTGGGCATCCGCAATGCAATTATCGCGGGCGTTGATACGGT CGAGCATGGCTCGATCATGGACGAGGCAACGATCCAGCTGGCTGTGGAACACGGCACTTACCTGTCGATGGACATCTACA ATACCGAATACATCCTCTCTGAAGGCGCTAAGAACGGGCTGCTGGAAGAGTCGCTCGCCAAGGAGCGCTCAATCTCGGCG CGCCAGCGGGCGAGCTTTACCGCCGCTGTTGAGGCGGGCGCGAAGGTCGTGTTCGGGTCAGACGCAGGCGTCTATCCCCA TGGCCTCAATGGCAACCAGTTCTCGCGCATGGTGACGTTCGGCATGACGCCGATGCAGGCGTTGCGGGCGGGTACGTCCT TTGCGGCAGAAGCGCTTGGCAAGACTGGCGAAGTCGGCTGCGGTGATGTGGGCTGCAAGGCAGACTTCGTGGCCGTCAGC GCCGATCCGCTGGCCGACATGCAACGCCTTGCCGATGTGGAGTTCGTGATGAAGGGCGGGGTCGTCTACAAGCAGGACGG CGCGCCGCAGGCCCCGTCATTCTAG
Upstream 100 bases:
>100_bases CCCTTAGGTTCGTCAAGCGCGCCGAGGTGCTTGACGCGGCAGCCCCCACCACCGCAGAACAGTCACATAACATGACGGAA AATACAGGAGTTGGTTGTCC
Downstream 100 bases:
>100_bases GGCTTTGCCATCATGGAGTTCACGCCCTTTCCCGATGTCACCGCGCTGGCGGCCCCCGTCTTCGTGGCGTCGGTTGCATG GGAATGGTGGGCAGTGAAAA
Product: amidohydrolase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 434; Mature: 434
Protein sequence:
>434_residues MFTRALATVATAFMIAGGAASAETVYLTAGHFVDPVSGETVRDAAFVIEDGAVTGRGTKSSLKAPRGAKTVDLGAAYLMP GFIDMHVHLTSDAEDGPYYSLSLSDERMAIKGVKNARKTLLAGFTTVRNLGAESYGDVALREAIDAGEVPGPRLLVSGPP VGISGGHCSDTNLLPSEYRLKGEGVANGPWEMRAKVRENIKYGVDLIKTCSTGGVLSKGTALGAAQGTIEEIEAIVEEAH ARGLKVASHAHGTVGIRNAIIAGVDTVEHGSIMDEATIQLAVEHGTYLSMDIYNTEYILSEGAKNGLLEESLAKERSISA RQRASFTAAVEAGAKVVFGSDAGVYPHGLNGNQFSRMVTFGMTPMQALRAGTSFAAEALGKTGEVGCGDVGCKADFVAVS ADPLADMQRLADVEFVMKGGVVYKQDGAPQAPSF
Sequences:
>Translated_434_residues MFTRALATVATAFMIAGGAASAETVYLTAGHFVDPVSGETVRDAAFVIEDGAVTGRGTKSSLKAPRGAKTVDLGAAYLMP GFIDMHVHLTSDAEDGPYYSLSLSDERMAIKGVKNARKTLLAGFTTVRNLGAESYGDVALREAIDAGEVPGPRLLVSGPP VGISGGHCSDTNLLPSEYRLKGEGVANGPWEMRAKVRENIKYGVDLIKTCSTGGVLSKGTALGAAQGTIEEIEAIVEEAH ARGLKVASHAHGTVGIRNAIIAGVDTVEHGSIMDEATIQLAVEHGTYLSMDIYNTEYILSEGAKNGLLEESLAKERSISA RQRASFTAAVEAGAKVVFGSDAGVYPHGLNGNQFSRMVTFGMTPMQALRAGTSFAAEALGKTGEVGCGDVGCKADFVAVS ADPLADMQRLADVEFVMKGGVVYKQDGAPQAPSF >Mature_434_residues MFTRALATVATAFMIAGGAASAETVYLTAGHFVDPVSGETVRDAAFVIEDGAVTGRGTKSSLKAPRGAKTVDLGAAYLMP GFIDMHVHLTSDAEDGPYYSLSLSDERMAIKGVKNARKTLLAGFTTVRNLGAESYGDVALREAIDAGEVPGPRLLVSGPP VGISGGHCSDTNLLPSEYRLKGEGVANGPWEMRAKVRENIKYGVDLIKTCSTGGVLSKGTALGAAQGTIEEIEAIVEEAH ARGLKVASHAHGTVGIRNAIIAGVDTVEHGSIMDEATIQLAVEHGTYLSMDIYNTEYILSEGAKNGLLEESLAKERSISA RQRASFTAAVEAGAKVVFGSDAGVYPHGLNGNQFSRMVTFGMTPMQALRAGTSFAAEALGKTGEVGCGDVGCKADFVAVS ADPLADMQRLADVEFVMKGGVVYKQDGAPQAPSF
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.coelicolor SCO1861 [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=317, Percent_Identity=30.2839116719243, Blast_Score=107, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006680 [H]
Pfam domain/function: PF01979 Amidohydro_1 [H]
EC number: NA
Molecular weight: Translated: 45196; Mature: 45196
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFTRALATVATAFMIAGGAASAETVYLTAGHFVDPVSGETVRDAAFVIEDGAVTGRGTKS CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCEECCCCCCCCCCEEEEEECCCEECCCCHH SLKAPRGAKTVDLGAAYLMPGFIDMHVHLTSDAEDGPYYSLSLSDERMAIKGVKNARKTL HCCCCCCCCEEECCHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH LAGFTTVRNLGAESYGDVALREAIDAGEVPGPRLLVSGPPVGISGGHCSDTNLLPSEYRL HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHEE KGEGVANGPWEMRAKVRENIKYGVDLIKTCSTGGVLSKGTALGAAQGTIEEIEAIVEEAH ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ARGLKVASHAHGTVGIRNAIIAGVDTVEHGSIMDEATIQLAVEHGTYLSMDIYNTEYILS HCCCEEECCCCCCCCHHHHHEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHH EGAKNGLLEESLAKERSISARQRASFTAAVEAGAKVVFGSDAGVYPHGLNGNQFSRMVTF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHEEEE GMTPMQALRAGTSFAAEALGKTGEVGCGDVGCKADFVAVSADPLADMQRLADVEFVMKGG CCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC VVYKQDGAPQAPSF EEEECCCCCCCCCC >Mature Secondary Structure MFTRALATVATAFMIAGGAASAETVYLTAGHFVDPVSGETVRDAAFVIEDGAVTGRGTKS CCHHHHHHHHHHHHHCCCCCCCCEEEEEECCEECCCCCCCCCCEEEEEECCCEECCCCHH SLKAPRGAKTVDLGAAYLMPGFIDMHVHLTSDAEDGPYYSLSLSDERMAIKGVKNARKTL HCCCCCCCCEEECCHHHHCCCEEEEEEEEECCCCCCCEEEEEECCCHHHHHHHHHHHHHH LAGFTTVRNLGAESYGDVALREAIDAGEVPGPRLLVSGPPVGISGGHCSDTNLLPSEYRL HHHHHHHHHCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHEE KGEGVANGPWEMRAKVRENIKYGVDLIKTCSTGGVLSKGTALGAAQGTIEEIEAIVEEAH ECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH ARGLKVASHAHGTVGIRNAIIAGVDTVEHGSIMDEATIQLAVEHGTYLSMDIYNTEYILS HCCCEEECCCCCCCCHHHHHEECCCCCCCCCCCCCCEEEEEEECCCEEEEEECCCHHHHH EGAKNGLLEESLAKERSISARQRASFTAAVEAGAKVVFGSDAGVYPHGLNGNQFSRMVTF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHEEEE GMTPMQALRAGTSFAAEALGKTGEVGCGDVGCKADFVAVSADPLADMQRLADVEFVMKGG CCCHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC VVYKQDGAPQAPSF EEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]