Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797054
Identifier: 114797054
GI number: 114797054
Start: 417908
End: 418651
Strand: Direct
Name: 114797054
Synonym: HNE_0420
Alternate gene names: NA
Gene position: 417908-418651 (Clockwise)
Preceding gene: 114797989
Following gene: 114799814
Centisome position: 11.28
GC content: 61.96
Gene sequence:
>744_bases ATGACGGGGAAGGGCGGGGAAGGCGGCGCAGGCTTCGGCCATGTGCAGGACTGGGTGTTCGATCTCGACAACACGCTCTA TCCGGCTGAGTGCGATCTCTTTGCCGAGATTGACACGCGGATGACCGATTTCGTCTCCCGCTATCTGCAGATGGAGCGCG GCGAGGCCCGCAAGCTGCAGAAATCCTACTACGCCCAATATGGCACCACGCTCTCAGGCATGATGCAGGTTCACAATCTC GATCCGGCAGACTTCCTCCACTATGTGCACGAGATCGATCTCTCCCCGCTGCCCGACCTGCCGGACCTGCGCACGGCCAT CGCCGCGCTGCCCGGCCGCAAGTTCATCTACACCAATGGCTCGCGCCGCCATGCCGAGCGGGTGACCGAGAAGATGGGCC TTGCCCACCTTTTCCATGACAGCTTCGGCATTGTGGAGGCCGCCTACCGGCCCAAGCCGCATCTCGACGCCTACGAAACC TTCTGCCAGCTGCATCAGGTGAAACCGGAAGGCGCGATCTTCTTCGAGGATCTTGCCCGCAACCTGAAGCCCGCCAAATC CCTCGGCTTCACCACCGTGTTGGTCCACTCCGACAAAGACTGGAGCCACGAGCCCATTGAGGCCCGTCCCGCCGGGGCAG GGGACGCTTTCGGGGATGACGGCACCGGACACATCGATTATGTCACCGGCGACCTCGCCAGTTTCCTGAGCACGGCGGTG TCGAGCCTGACCGTAAAAGAATAA
Upstream 100 bases:
>100_bases CGGCCTACCGCACGGCCCTCTTCACCCGCACGCCTGCGCCGGTGGAGCGCAAGCTCGTCTACGAATTCTTCGCGCGCGAC TTTACCGAAGTGGCCGGTCA
Downstream 100 bases:
>100_bases GACCGAAGAGAGATGCCATGACCGACGCCCTTGCCCGTGTAATCGATGCTGCCTGGGAGGGCCGTGACCTCCTCTCCACC TCGACCACCGGTGAAGTGCG
Product: pyrimidine 5'-nucleotidase
Products: NA
Alternate protein names: Hydrolase; HAD-Superfamily Hydrolase; HAD Family Pyrimidine 5-Nucleotidase; HAD Family Hydrolase; HAD Superfamily Hydrolase; Hydrolase Haloacid Dehalogenase-Like Family; Phosphatase; Hydrolase Protein; HAD Superfamily Protein; Phosphoglycolate Phosphatase; Hydrolase Ripening-Related Protein-Like; Haloacid Dehalogenase Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase Family Protein; Hydrolase Of HAD Superfamily; Haloacid Dehalogenase
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTGKGGEGGAGFGHVQDWVFDLDNTLYPAECDLFAEIDTRMTDFVSRYLQMERGEARKLQKSYYAQYGTTLSGMMQVHNL DPADFLHYVHEIDLSPLPDLPDLRTAIAALPGRKFIYTNGSRRHAERVTEKMGLAHLFHDSFGIVEAAYRPKPHLDAYET FCQLHQVKPEGAIFFEDLARNLKPAKSLGFTTVLVHSDKDWSHEPIEARPAGAGDAFGDDGTGHIDYVTGDLASFLSTAV SSLTVKE
Sequences:
>Translated_247_residues MTGKGGEGGAGFGHVQDWVFDLDNTLYPAECDLFAEIDTRMTDFVSRYLQMERGEARKLQKSYYAQYGTTLSGMMQVHNL DPADFLHYVHEIDLSPLPDLPDLRTAIAALPGRKFIYTNGSRRHAERVTEKMGLAHLFHDSFGIVEAAYRPKPHLDAYET FCQLHQVKPEGAIFFEDLARNLKPAKSLGFTTVLVHSDKDWSHEPIEARPAGAGDAFGDDGTGHIDYVTGDLASFLSTAV SSLTVKE >Mature_246_residues TGKGGEGGAGFGHVQDWVFDLDNTLYPAECDLFAEIDTRMTDFVSRYLQMERGEARKLQKSYYAQYGTTLSGMMQVHNLD PADFLHYVHEIDLSPLPDLPDLRTAIAALPGRKFIYTNGSRRHAERVTEKMGLAHLFHDSFGIVEAAYRPKPHLDAYETF CQLHQVKPEGAIFFEDLARNLKPAKSLGFTTVLVHSDKDWSHEPIEARPAGAGDAFGDDGTGHIDYVTGDLASFLSTAVS SLTVKE
Specific function: Unknown
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321214, Length=217, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27428; Mature: 27297
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGKGGEGGAGFGHVQDWVFDLDNTLYPAECDLFAEIDTRMTDFVSRYLQMERGEARKLQ CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KSYYAQYGTTLSGMMQVHNLDPADFLHYVHEIDLSPLPDLPDLRTAIAALPGRKFIYTNG HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECC SRRHAERVTEKMGLAHLFHDSFGIVEAAYRPKPHLDAYETFCQLHQVKPEGAIFFEDLAR CHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH NLKPAKSLGFTTVLVHSDKDWSHEPIEARPAGAGDAFGDDGTGHIDYVTGDLASFLSTAV HCCHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH SSLTVKE HHHCCCC >Mature Secondary Structure TGKGGEGGAGFGHVQDWVFDLDNTLYPAECDLFAEIDTRMTDFVSRYLQMERGEARKLQ CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHH KSYYAQYGTTLSGMMQVHNLDPADFLHYVHEIDLSPLPDLPDLRTAIAALPGRKFIYTNG HHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEEECC SRRHAERVTEKMGLAHLFHDSFGIVEAAYRPKPHLDAYETFCQLHQVKPEGAIFFEDLAR CHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH NLKPAKSLGFTTVLVHSDKDWSHEPIEARPAGAGDAFGDDGTGHIDYVTGDLASFLSTAV HCCHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHH SSLTVKE HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA