Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
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Accession | NC_008358 |
Length | 3,705,021 |
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The map label for this gene is 114797989
Identifier: 114797989
GI number: 114797989
Start: 416880
End: 417911
Strand: Direct
Name: 114797989
Synonym: HNE_0419
Alternate gene names: NA
Gene position: 416880-417911 (Clockwise)
Preceding gene: 114798995
Following gene: 114797054
Centisome position: 11.25
GC content: 65.21
Gene sequence:
>1032_bases ATGGCGCTGGAACGCTGGTTTCTTAGAATTGTAGTTTTGGCCATCGCCTCGCTGGCCGTCCTTCTGCTGCCCGCAGAGGC GCAGGAAGGCGAAGGCTGGAAGCTGTGCAATCGCACGAGCTTCGTGATCGAAGCGGCGGTCGGCCATCAGCAGGGCGCCG GCATCACGGTCGAAGGCTGGACGAAGCTTCACCCCGGCGCCTGCCGCATCGCGCTGCCAGGCCCGCTGAAAGCCGGTGTG CATTATCTTTATGGCCGCACCTCCACCGCTCACCTTGGCGGCGGGCGCGAATGGGGCGGGCGTCAGGAACTGTGCGTGGA CCCGACCGGCGGCTTCTCGCTGGAAAGCCCACCAGACTGCGCCGCGATGGGGCTTGAGGCTCAGGGCTTCCGGCCCGTGG ACATCACCAAGGATGGCAGCTGGACGAACCTCTTCACCGAGGTCGAGAACTATTCTGAAGACTCCGCCCGCAATGCCGGT CTTCAGCGCCTGCTGGACGAGGCCGGGGTGGTCTCGGGCAGTGTCGATGGCTATATCGGCCAGCGCACCCGCGCCGCGAT TGCCGACTTTCTGAAGCTGCGCGGCCTGCCGGCCAATCTCTCTGATGCGGATCTGATCGACTATCTGGAACAGGCCGCCG AGGAACGGGGCCGCAATGTCGGCTTCACGCTCTGCAATCGCACCAAAAACCGCATCTGGAGCGCCATTTCCCGGCGCAGC CCGGAGGGCTGGGAAAGCCGGGGCTGGTGGCGCATCGAGGCGGGCGGCTGCGCCCGTGTGATCGACCGCCCGCTGCGCGG CTCGGAACATTTCGTCTATGCCGAGATGGAAGACGGCGCCCAGCTGCGCACACTCGCCAATGCCGATGAGGCCTTCTGCG TCGGGCGTTCGAAATTCGCCATTTCGGGCCGCGAAGACTGTGAGGATTCGGCCTACCGCACGGCCCTCTTCACCCGCACG CCTGCGCCGGTGGAGCGCAAGCTCGTCTACGAATTCTTCGCGCGCGACTTTACCGAAGTGGCCGGTCAATGA
Upstream 100 bases:
>100_bases CTTGAAACGGCGGCACAATCTGTAAATCATGGTGTTGGGGCGGCGGTTATTCTGGATGGGCGTGCGCCGCATGCCCTGCT CATGGAGCTGTTCACCGAAC
Downstream 100 bases:
>100_bases CGGGGAAGGGCGGGGAAGGCGGCGCAGGCTTCGGCCATGTGCAGGACTGGGTGTTCGATCTCGACAACACGCTCTATCCG GCTGAGTGCGATCTCTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MALERWFLRIVVLAIASLAVLLLPAEAQEGEGWKLCNRTSFVIEAAVGHQQGAGITVEGWTKLHPGACRIALPGPLKAGV HYLYGRTSTAHLGGGREWGGRQELCVDPTGGFSLESPPDCAAMGLEAQGFRPVDITKDGSWTNLFTEVENYSEDSARNAG LQRLLDEAGVVSGSVDGYIGQRTRAAIADFLKLRGLPANLSDADLIDYLEQAAEERGRNVGFTLCNRTKNRIWSAISRRS PEGWESRGWWRIEAGGCARVIDRPLRGSEHFVYAEMEDGAQLRTLANADEAFCVGRSKFAISGREDCEDSAYRTALFTRT PAPVERKLVYEFFARDFTEVAGQ
Sequences:
>Translated_343_residues MALERWFLRIVVLAIASLAVLLLPAEAQEGEGWKLCNRTSFVIEAAVGHQQGAGITVEGWTKLHPGACRIALPGPLKAGV HYLYGRTSTAHLGGGREWGGRQELCVDPTGGFSLESPPDCAAMGLEAQGFRPVDITKDGSWTNLFTEVENYSEDSARNAG LQRLLDEAGVVSGSVDGYIGQRTRAAIADFLKLRGLPANLSDADLIDYLEQAAEERGRNVGFTLCNRTKNRIWSAISRRS PEGWESRGWWRIEAGGCARVIDRPLRGSEHFVYAEMEDGAQLRTLANADEAFCVGRSKFAISGREDCEDSAYRTALFTRT PAPVERKLVYEFFARDFTEVAGQ >Mature_342_residues ALERWFLRIVVLAIASLAVLLLPAEAQEGEGWKLCNRTSFVIEAAVGHQQGAGITVEGWTKLHPGACRIALPGPLKAGVH YLYGRTSTAHLGGGREWGGRQELCVDPTGGFSLESPPDCAAMGLEAQGFRPVDITKDGSWTNLFTEVENYSEDSARNAGL QRLLDEAGVVSGSVDGYIGQRTRAAIADFLKLRGLPANLSDADLIDYLEQAAEERGRNVGFTLCNRTKNRIWSAISRRSP EGWESRGWWRIEAGGCARVIDRPLRGSEHFVYAEMEDGAQLRTLANADEAFCVGRSKFAISGREDCEDSAYRTALFTRTP APVERKLVYEFFARDFTEVAGQ
Specific function: Unknown
COG id: COG5480
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37619; Mature: 37487
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALERWFLRIVVLAIASLAVLLLPAEAQEGEGWKLCNRTSFVIEAAVGHQQGAGITVEGW CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEECC TKLHPGACRIALPGPLKAGVHYLYGRTSTAHLGGGREWGGRQELCVDPTGGFSLESPPDC CEECCCEEEEECCCCHHHCHHEEECCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCH AAMGLEAQGFRPVDITKDGSWTNLFTEVENYSEDSARNAGLQRLLDEAGVVSGSVDGYIG HHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC QRTRAAIADFLKLRGLPANLSDADLIDYLEQAAEERGRNVGFTLCNRTKNRIWSAISRRS HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCC PEGWESRGWWRIEAGGCARVIDRPLRGSEHFVYAEMEDGAQLRTLANADEAFCVGRSKFA CCCCCCCCEEEEECCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCCCCCEEECCCEEE ISGREDCEDSAYRTALFTRTPAPVERKLVYEFFARDFTEVAGQ ECCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure ALERWFLRIVVLAIASLAVLLLPAEAQEGEGWKLCNRTSFVIEAAVGHQQGAGITVEGW CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEEECCCCCCCCEEEECC TKLHPGACRIALPGPLKAGVHYLYGRTSTAHLGGGREWGGRQELCVDPTGGFSLESPPDC CEECCCEEEEECCCCHHHCHHEEECCCCEEECCCCCCCCCCCCEEECCCCCCCCCCCCCH AAMGLEAQGFRPVDITKDGSWTNLFTEVENYSEDSARNAGLQRLLDEAGVVSGSVDGYIG HHCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC QRTRAAIADFLKLRGLPANLSDADLIDYLEQAAEERGRNVGFTLCNRTKNRIWSAISRRS HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHCC PEGWESRGWWRIEAGGCARVIDRPLRGSEHFVYAEMEDGAQLRTLANADEAFCVGRSKFA CCCCCCCCEEEEECCCHHHHHCCCCCCCCCEEEEECCCCCHHHHHCCCCCCEEECCCEEE ISGREDCEDSAYRTALFTRTPAPVERKLVYEFFARDFTEVAGQ ECCCCCCCHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA