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The map label for this gene is yajC [H]

Identifier: 114331421

GI number: 114331421

Start: 1513252

End: 1513716

Strand: Direct

Name: yajC [H]

Synonym: Neut_1432

Alternate gene names: 114331421

Gene position: 1513252-1513716 (Clockwise)

Preceding gene: 114331420

Following gene: 114331422

Centisome position: 56.87

GC content: 46.24

Gene sequence:

>465_bases
ATGCTCATAAAAGAAGCTTTCGCCCAGGCCGCCAATAGTACGGCTCAGACTTCCGACCCCACTCTGATGAGCTTTCTACC
CATGATTGGTATCGTGGTCATTTTTTATTTTTTGCTGATCCGTCCGCAAACCAAGCGGGCCAAAGAGCAAAAACAAATGC
AGAACGAATTACAGAAAGGTGACGAGATTATCATCAGTGGAGGAGAACTGGGCCGAGTTGTGAGCACCGGAGACAGCTAC
CTCACCATGGAAATTGCAGTAGGCGTTGAAATTACCGTACTCAAATCTTCCGTTCAAACATTATTGCCCAAGGGAACGCT
CAGAAGCATAGAAACCGGCAAAAGCAGCCGGGCACTCAAAAGCGGCAAGCAGAAATCTAATGAACCCCGCCAGGCCGAAC
CGGAAAATAAAGAAACTGAAATCAGTGAAGCTGATTCAACAAAACAGGATAACGAAAAGAATTAA

Upstream 100 bases:

>100_bases
CAGTTTGAACAGTTTGCATGCAGATTTTCCGGCTAGAACTTCATGCTAAAATACATAACGATTCAGTTTCCATTCATACC
CAATTGAAGGAGAAGACCTT

Downstream 100 bases:

>100_bases
TTTACCGGTATGCTCCGCTCTTTTTCGATTATCTGAAATTGTGGCGTAACTTCCGGCACCCCCTTTCTTCTGAAATACTG
GCCATTATGAACCGCTACCC

Product: preprotein translocase, YajC subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLIKEAFAQAANSTAQTSDPTLMSFLPMIGIVVIFYFLLIRPQTKRAKEQKQMQNELQKGDEIIISGGELGRVVSTGDSY
LTMEIAVGVEITVLKSSVQTLLPKGTLRSIETGKSSRALKSGKQKSNEPRQAEPENKETEISEADSTKQDNEKN

Sequences:

>Translated_154_residues
MLIKEAFAQAANSTAQTSDPTLMSFLPMIGIVVIFYFLLIRPQTKRAKEQKQMQNELQKGDEIIISGGELGRVVSTGDSY
LTMEIAVGVEITVLKSSVQTLLPKGTLRSIETGKSSRALKSGKQKSNEPRQAEPENKETEISEADSTKQDNEKN
>Mature_154_residues
MLIKEAFAQAANSTAQTSDPTLMSFLPMIGIVVIFYFLLIRPQTKRAKEQKQMQNELQKGDEIIISGGELGRVVSTGDSY
LTMEIAVGVEITVLKSSVQTLLPKGTLRSIETGKSSRALKSGKQKSNEPRQAEPENKETEISEADSTKQDNEKN

Specific function: Not known; elicits an immunogenic response in mice [H]

COG id: COG1862

COG function: function code U; Preprotein translocase subunit YajC

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0092 family [H]

Homologues:

Organism=Escherichia coli, GI1786608, Length=111, Percent_Identity=35.1351351351351, Blast_Score=75, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003849 [H]

Pfam domain/function: PF02699 YajC [H]

EC number: NA

Molecular weight: Translated: 16933; Mature: 16933

Theoretical pI: Translated: 6.97; Mature: 6.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIKEAFAQAANSTAQTSDPTLMSFLPMIGIVVIFYFLLIRPQTKRAKEQKQMQNELQKG
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
DEIIISGGELGRVVSTGDSYLTMEIAVGVEITVLKSSVQTLLPKGTLRSIETGKSSRALK
CEEEEECCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH
SGKQKSNEPRQAEPENKETEISEADSTKQDNEKN
HHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC
>Mature Secondary Structure
MLIKEAFAQAANSTAQTSDPTLMSFLPMIGIVVIFYFLLIRPQTKRAKEQKQMQNELQKG
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
DEIIISGGELGRVVSTGDSYLTMEIAVGVEITVLKSSVQTLLPKGTLRSIETGKSSRALK
CEEEEECCCCCCEEECCCCEEEEEEECCCCHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH
SGKQKSNEPRQAEPENKETEISEADSTKQDNEKN
HHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9826342 [H]