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The map label for this gene is yibD [C]

Identifier: 113477542

GI number: 113477542

Start: 6360766

End: 6361701

Strand: Reverse

Name: yibD [C]

Synonym: Tery_4122

Alternate gene names: 113477542

Gene position: 6361701-6360766 (Counterclockwise)

Preceding gene: 113477543

Following gene: 113477541

Centisome position: 82.09

GC content: 34.62

Gene sequence:

>936_bases
ATGTCTTCAATTGAAATTCAAAAAAATATTCAACCAATAGTTTCTGTGGTTATATGCACTCATAATAGAGCTGATAGGTT
GATTTTAGCTTTAGAAGGACTGGTAAAACAGTCTTTTCCTAATCAAAATTTTGAAGTTTTAATTATAGATAATGTTTCTG
AGGATAATACTAAAGAAATAGGCGATCGCTATCAAGAAAACTATTCTAATTTTCGTTATATATATGAACCAGTACTGGGA
CTGTCAAGGGCTCGTAATTTAGGTTTAAGTCTGGCCAAAGGTAAATATGTTGCATATTTAGATGATGATGCTATTCCTTG
TGAGGAATGGTTAGAGTCGATATTAGATAGTTTTACAACGGTTAAACCATCTCCAGTATGTGTTGGTGGACCTATTTATG
GGTTATGGGAAATTCCTAAACCAGACTGGATAGATAAAACTATGGAGGATTTTTTTACTGTACTTGACTATGGCTCACAA
CCTAAGTGGTTTAAAACAAATAAATTTCCCTATGGGGCAAATATGGCATATACCAAGGAGTCTCTCAAAAATGTGGGGGG
TTTTAATGAAAAGTTAGGCCGTCAAGGAAAAAAACTATTATCCCAAGAAGAGTTATTACTAAATTTAACTTTAGAACAAT
TTGGTGGGAAGTTTTATTACAACCCTAAAGCGTCTGTGCAGCATTGGGTACCGAAGGAAAGAATTAATGCTAAATGGTTG
TTGAGTCGCAGTTATTGGCAAGGCCGGTCTGATGCGATCGCTGATCAGATAATAGGTAAGTCCATAACTCGTGAATATCT
AGAAAGTTTGTGGAATTTACTTAATTTAAAAAGAGTTATTGCACAATTTTGGCCACAAAGTAGAGTACGATTAACAACTA
GGTGTCGTATTTGGCGTAGTTGGGGTTATTTTGTACAGGTCTGGTTTAATAAATAA

Upstream 100 bases:

>100_bases
ACTATTAATATCTATTTATTTTGATGTTTTCTCTACTGCTCTATGGCTTCATGCTTGATCAATTTATAAACTGCTAGAAA
AAAGTTTTATTAGACTATTT

Downstream 100 bases:

>100_bases
GAAAAAATGGAGAATATTTTGATTTTTGCGTTTATAATTTTTCATTAATTAAAAGGTGATTATGAAACCAAAACTTCAAG
CACCTATTTTTATTTTTGGA

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: Glycosyltransferase; Glycosyl Transferase Group 2 Family Protein; Succinoglycan Biosynthesis Protein; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 Protein; Glycosyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyltransferase Protein; Dolichyl-Phosphate Mannose Synthase Related Protein; Glycosyltransferase AglE; Glycosyl Transferase Group 2 Family; Membrane Sugar Transferase; Glycoside Hydrolase Family 2 Protein; Family Glycosyltransferase; Cell Wall Biosynthesis Glycosyltransferase-Like Protein; Sulfatase; Group 2 Glycosyl Transferase; Arylsulfatase; Glycosyltransferase AglG; Glycosyltransferase-Like; Cell Wall Biogenesis Glycosyltransferase-Like Protein; Minor Teichoic Acids Biosynthesis Protein Ggab RP; Cell Wall Biosynthesis Glycosyltransferase

Number of amino acids: Translated: 311; Mature: 310

Protein sequence:

>311_residues
MSSIEIQKNIQPIVSVVICTHNRADRLILALEGLVKQSFPNQNFEVLIIDNVSEDNTKEIGDRYQENYSNFRYIYEPVLG
LSRARNLGLSLAKGKYVAYLDDDAIPCEEWLESILDSFTTVKPSPVCVGGPIYGLWEIPKPDWIDKTMEDFFTVLDYGSQ
PKWFKTNKFPYGANMAYTKESLKNVGGFNEKLGRQGKKLLSQEELLLNLTLEQFGGKFYYNPKASVQHWVPKERINAKWL
LSRSYWQGRSDAIADQIIGKSITREYLESLWNLLNLKRVIAQFWPQSRVRLTTRCRIWRSWGYFVQVWFNK

Sequences:

>Translated_311_residues
MSSIEIQKNIQPIVSVVICTHNRADRLILALEGLVKQSFPNQNFEVLIIDNVSEDNTKEIGDRYQENYSNFRYIYEPVLG
LSRARNLGLSLAKGKYVAYLDDDAIPCEEWLESILDSFTTVKPSPVCVGGPIYGLWEIPKPDWIDKTMEDFFTVLDYGSQ
PKWFKTNKFPYGANMAYTKESLKNVGGFNEKLGRQGKKLLSQEELLLNLTLEQFGGKFYYNPKASVQHWVPKERINAKWL
LSRSYWQGRSDAIADQIIGKSITREYLESLWNLLNLKRVIAQFWPQSRVRLTTRCRIWRSWGYFVQVWFNK
>Mature_310_residues
SSIEIQKNIQPIVSVVICTHNRADRLILALEGLVKQSFPNQNFEVLIIDNVSEDNTKEIGDRYQENYSNFRYIYEPVLGL
SRARNLGLSLAKGKYVAYLDDDAIPCEEWLESILDSFTTVKPSPVCVGGPIYGLWEIPKPDWIDKTMEDFFTVLDYGSQP
KWFKTNKFPYGANMAYTKESLKNVGGFNEKLGRQGKKLLSQEELLLNLTLEQFGGKFYYNPKASVQHWVPKERINAKWLL
SRSYWQGRSDAIADQIIGKSITREYLESLWNLLNLKRVIAQFWPQSRVRLTTRCRIWRSWGYFVQVWFNK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790044, Length=90, Percent_Identity=38.8888888888889, Blast_Score=68, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36219; Mature: 36088

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSIEIQKNIQPIVSVVICTHNRADRLILALEGLVKQSFPNQNFEVLIIDNVSEDNTKEI
CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHH
GDRYQENYSNFRYIYEPVLGLSRARNLGLSLAKGKYVAYLDDDAIPCEEWLESILDSFTT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHC
VKPSPVCVGGPIYGLWEIPKPDWIDKTMEDFFTVLDYGSQPKWFKTNKFPYGANMAYTKE
CCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHH
SLKNVGGFNEKLGRQGKKLLSQEELLLNLTLEQFGGKFYYNPKASVQHWVPKERINAKWL
HHHHCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHCCEEEECCCCCHHHCCCHHHCCCEEE
LSRSYWQGRSDAIADQIIGKSITREYLESLWNLLNLKRVIAQFWPQSRVRLTTRCRIWRS
EEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCC
WGYFVQVWFNK
CCEEEEEEECC
>Mature Secondary Structure 
SSIEIQKNIQPIVSVVICTHNRADRLILALEGLVKQSFPNQNFEVLIIDNVSEDNTKEI
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHH
GDRYQENYSNFRYIYEPVLGLSRARNLGLSLAKGKYVAYLDDDAIPCEEWLESILDSFTT
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHC
VKPSPVCVGGPIYGLWEIPKPDWIDKTMEDFFTVLDYGSQPKWFKTNKFPYGANMAYTKE
CCCCCEEECCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCHHHHHH
SLKNVGGFNEKLGRQGKKLLSQEELLLNLTLEQFGGKFYYNPKASVQHWVPKERINAKWL
HHHHCCCCHHHHHHHHHHHHHHHHHHHEEEHHHHCCEEEECCCCCHHHCCCHHHCCCEEE
LSRSYWQGRSDAIADQIIGKSITREYLESLWNLLNLKRVIAQFWPQSRVRLTTRCRIWRS
EEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHCC
WGYFVQVWFNK
CCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA