| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477543
Identifier: 113477543
GI number: 113477543
Start: 6361841
End: 6362395
Strand: Reverse
Name: 113477543
Synonym: Tery_4123
Alternate gene names: NA
Gene position: 6362395-6361841 (Counterclockwise)
Preceding gene: 113477544
Following gene: 113477542
Centisome position: 82.09
GC content: 31.17
Gene sequence:
>555_bases TTGCGTTGTAAATCTAGAGTTTATGGTTTTAAACTTTTGAGTTATCAAGTTAGAGATGTGCAACCTATTTCCGATCCAGA GAAGTTTTTATTTAGTCTATATGAAAATGGTTATAAGTTTATTTATTTAACTCGTAGTAATTTAGTGGCTCATGCCCTAT CTAATATTAATGCTAGCCTGAAACAAAAATTTCACCACCGTTCTTGTGAAGGTGAACTGGAGTACAAACCGATATTGGTA GAAATTGAAGAAGTATTTCAAAGGATTCAATATAGCGAAGAACTGGGAGAGTATGAAAAGAAATTACTGAAGAAAATACC CCACATTAGTATTACATATGAGGAGAATCTGCTTGACAGGGAATGTCATCAAAAAACTGTAGATAAAGTTCTAGAATTAT TTAATTTACCCTCAAATCCTGTGAAAACTAATCTGGTCAAGTTAATGCCATTAGATCTTTCAAAAATGGTAGAAAATTAT GAGGAGTTAATTCAAGCAATTAAAAAAAGTAAGTACGCACATTTTATTAAGGATAATAGCTTAAATAGCTACTAG
Upstream 100 bases:
>100_bases GTTAGTAAACCTCTTAAATAGTCAAGATAAAGTTCATTGTGATTATGAAATATTACACGATCGTCTTTTATTTCCTCGTA GTTATATAGACTTATGTGCT
Downstream 100 bases:
>100_bases CTAGTTTGGCTTAATTTGATTGGTAAATAATAAGTTTTAACTATTAATATCTATTTATTTTGATGTTTTCTCTACTGCTC TATGGCTTCATGCTTGATCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MRCKSRVYGFKLLSYQVRDVQPISDPEKFLFSLYENGYKFIYLTRSNLVAHALSNINASLKQKFHHRSCEGELEYKPILV EIEEVFQRIQYSEELGEYEKKLLKKIPHISITYEENLLDRECHQKTVDKVLELFNLPSNPVKTNLVKLMPLDLSKMVENY EELIQAIKKSKYAHFIKDNSLNSY
Sequences:
>Translated_184_residues MRCKSRVYGFKLLSYQVRDVQPISDPEKFLFSLYENGYKFIYLTRSNLVAHALSNINASLKQKFHHRSCEGELEYKPILV EIEEVFQRIQYSEELGEYEKKLLKKIPHISITYEENLLDRECHQKTVDKVLELFNLPSNPVKTNLVKLMPLDLSKMVENY EELIQAIKKSKYAHFIKDNSLNSY >Mature_184_residues MRCKSRVYGFKLLSYQVRDVQPISDPEKFLFSLYENGYKFIYLTRSNLVAHALSNINASLKQKFHHRSCEGELEYKPILV EIEEVFQRIQYSEELGEYEKKLLKKIPHISITYEENLLDRECHQKTVDKVLELFNLPSNPVKTNLVKLMPLDLSKMVENY EELIQAIKKSKYAHFIKDNSLNSY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21770; Mature: 21770
Theoretical pI: Translated: 8.41; Mature: 8.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRCKSRVYGFKLLSYQVRDVQPISDPEKFLFSLYENGYKFIYLTRSNLVAHALSNINASL CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHCCHHH KQKFHHRSCEGELEYKPILVEIEEVFQRIQYSEELGEYEKKLLKKIPHISITYEENLLDR HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH ECHQKTVDKVLELFNLPSNPVKTNLVKLMPLDLSKMVENYEELIQAIKKSKYAHFIKDNS HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNSY CCCC >Mature Secondary Structure MRCKSRVYGFKLLSYQVRDVQPISDPEKFLFSLYENGYKFIYLTRSNLVAHALSNINASL CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEEEEECHHHHHHHHHHCCHHH KQKFHHRSCEGELEYKPILVEIEEVFQRIQYSEELGEYEKKLLKKIPHISITYEENLLDR HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHH ECHQKTVDKVLELFNLPSNPVKTNLVKLMPLDLSKMVENYEELIQAIKKSKYAHFIKDNS HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC LNSY CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA