| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113477541
Identifier: 113477541
GI number: 113477541
Start: 6359859
End: 6360704
Strand: Reverse
Name: 113477541
Synonym: Tery_4121
Alternate gene names: NA
Gene position: 6360704-6359859 (Counterclockwise)
Preceding gene: 113477542
Following gene: 113477540
Centisome position: 82.07
GC content: 32.27
Gene sequence:
>846_bases ATGAAACCAAAACTTCAAGCACCTATTTTTATTTTTGGATGTCCTCGTTCTGGGACAACATTATTACAAAGTATATTGGC AACTCATCCTGAAATAGCTTCTTTTCCTGAAACTAAGTTTTTTCTCTATGGAGTAGCTAAGTATGAGCCTAAGCGAAAAA AATTTGGATTAATTTCCCGGCGTTTAAAACCACATTTAAATCAATACTTTAAAAATCAAATTAATCGCCCAGAAATGTTA AAATATTTTCCTAAAATTCCCATTCTAGATTTTATAGATTTATATACTCGTAGTTTTATTAAGGTCTTAAATATTTTAAC TGTAGAAGAAGGTAAGAGTCTGTGGCTAGAAAAAACACCGGACCATTTGCTTTATTTAGACTACATAGAAAAGATGTTAC CTGAAGCTAGAATGATCCATCTTTTAAGAAATGGTTCTGATGTGGTAGCTTCTTTGTATGAAGTGACTCATAAATATCCT CAAGAATGGTATGGGGCATGGGACATAAACCGCTGCCTAGAAAGATGGAAGGAGTCAATAGAAATTAGTATGAAGTATTC TCAGAAATCTAATCATATTTTGCTGAGTTATGACGAGCTTGTTACAAATACTTCTGCTATGATCAAGAGGGTATGTAATT TTCTATCTCTAGAGTTTGATGAAACGATGATCACAAGTTACAGTCAAGCTGCTACGTTTTTAAGTTCAGAGAAAGGGGGG AGAACAGTTAGTCAGGAAATTAAAAAATTTGGTTCTGACAAGTTCAATAAAATCTTTGATGAATCTCAGAAGCAATATAT ATTGGATAATATTTCTGGGTTTAACTTAGAATTATTAAAATCATAG
Upstream 100 bases:
>100_bases AGTTGGGGTTATTTTGTACAGGTCTGGTTTAATAAATAAGAAAAAATGGAGAATATTTTGATTTTTGCGTTTATAATTTT TCATTAATTAAAAGGTGATT
Downstream 100 bases:
>100_bases GACTATATTGACATACTTCTCGGTGTCAACTCCTGGGGCGGAGGATGAAATTAGGATCCAATGTTCAAGGAGTCTACTTT TATTAAATATTTTGCCTCGT
Product: sulfotransferase
Products: NA
Alternate protein names: Sulfotransferase Domain Superfamily; Sulfotransferase Domain Family; Sulfotransferase Domain-Containing Protein; Protein-Tyrosine Sulfotransferase
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MKPKLQAPIFIFGCPRSGTTLLQSILATHPEIASFPETKFFLYGVAKYEPKRKKFGLISRRLKPHLNQYFKNQINRPEML KYFPKIPILDFIDLYTRSFIKVLNILTVEEGKSLWLEKTPDHLLYLDYIEKMLPEARMIHLLRNGSDVVASLYEVTHKYP QEWYGAWDINRCLERWKESIEISMKYSQKSNHILLSYDELVTNTSAMIKRVCNFLSLEFDETMITSYSQAATFLSSEKGG RTVSQEIKKFGSDKFNKIFDESQKQYILDNISGFNLELLKS
Sequences:
>Translated_281_residues MKPKLQAPIFIFGCPRSGTTLLQSILATHPEIASFPETKFFLYGVAKYEPKRKKFGLISRRLKPHLNQYFKNQINRPEML KYFPKIPILDFIDLYTRSFIKVLNILTVEEGKSLWLEKTPDHLLYLDYIEKMLPEARMIHLLRNGSDVVASLYEVTHKYP QEWYGAWDINRCLERWKESIEISMKYSQKSNHILLSYDELVTNTSAMIKRVCNFLSLEFDETMITSYSQAATFLSSEKGG RTVSQEIKKFGSDKFNKIFDESQKQYILDNISGFNLELLKS >Mature_281_residues MKPKLQAPIFIFGCPRSGTTLLQSILATHPEIASFPETKFFLYGVAKYEPKRKKFGLISRRLKPHLNQYFKNQINRPEML KYFPKIPILDFIDLYTRSFIKVLNILTVEEGKSLWLEKTPDHLLYLDYIEKMLPEARMIHLLRNGSDVVASLYEVTHKYP QEWYGAWDINRCLERWKESIEISMKYSQKSNHILLSYDELVTNTSAMIKRVCNFLSLEFDETMITSYSQAATFLSSEKGG RTVSQEIKKFGSDKFNKIFDESQKQYILDNISGFNLELLKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32899; Mature: 32899
Theoretical pI: Translated: 9.41; Mature: 9.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKLQAPIFIFGCPRSGTTLLQSILATHPEIASFPETKFFLYGVAKYEPKRKKFGLISR CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHCCCCCCEEEEEHHHCCCHHHHHHHHHH RLKPHLNQYFKNQINRPEMLKYFPKIPILDFIDLYTRSFIKVLNILTVEEGKSLWLEKTP HHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DHLLYLDYIEKMLPEARMIHLLRNGSDVVASLYEVTHKYPQEWYGAWDINRCLERWKESI CCEEHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHH EISMKYSQKSNHILLSYDELVTNTSAMIKRVCNFLSLEFDETMITSYSQAATFLSSEKGG EEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC RTVSQEIKKFGSDKFNKIFDESQKQYILDNISGFNLELLKS CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC >Mature Secondary Structure MKPKLQAPIFIFGCPRSGTTLLQSILATHPEIASFPETKFFLYGVAKYEPKRKKFGLISR CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCHHCCCCCCEEEEEHHHCCCHHHHHHHHHH RLKPHLNQYFKNQINRPEMLKYFPKIPILDFIDLYTRSFIKVLNILTVEEGKSLWLEKTP HHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC DHLLYLDYIEKMLPEARMIHLLRNGSDVVASLYEVTHKYPQEWYGAWDINRCLERWKESI CCEEHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHCHHHHCCCCCHHHHHHHHHHHH EISMKYSQKSNHILLSYDELVTNTSAMIKRVCNFLSLEFDETMITSYSQAATFLSSEKGG EEEEEECCCCCCEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCC RTVSQEIKKFGSDKFNKIFDESQKQYILDNISGFNLELLKS CHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA