Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
---|---|
Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is fabG [H]
Identifier: 113477222
GI number: 113477222
Start: 5774037
End: 5774372
Strand: Reverse
Name: fabG [H]
Synonym: Tery_3758
Alternate gene names: 113477222
Gene position: 5774372-5774037 (Counterclockwise)
Preceding gene: 113477223
Following gene: 113477221
Centisome position: 74.51
GC content: 34.23
Gene sequence:
>336_bases ATGGCTGGTGTGAATAATCCTGATACAGTACAAAAAATGGTTGATTTTGCTATTGAAAAGTTTGGTGCAGTTGATATTGC TGTCTCTAATATTTCCCTGGAAAAAAGACAAAATTTTTTAGATATCTCCCTTAAAGATTGGCATGAAGTAATTAAAACGA ACCTTAATTCTGCATTCTATCTAGCTAAGGCTATAATTCCAGGGATGAAAGCTAGAAGATGGGGTCGGATTATTTATATT TCTGGTTATTATGGTTCAATAGGTACACTATACCAAGCTCATAATGTTACCTGTAAAGGAGGTCTTAATGCTTTTGCTAA AGCGATCGCTACATAA
Upstream 100 bases:
>100_bases TCTGGTGCCAATGTAGTGATTGATGGTCATCGCAATTAAAAAGCGATGGAAGAAGTTGCTGAAAAAACTCGTGATTTAGG GGGATCAAGAAATAGCGGTG
Downstream 100 bases:
>100_bases TTTGGACCTTACGGAATTACTGCAAAGAGGGTTAGTCCAGGGACAATTGATACTATCCGTATTTCTAAAGATTACCCCAA TTTAGACACTAAATACGAAA
Product: 3-oxoacyl-(acyl-carrier protein) reductase
Products: NA
Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]
Number of amino acids: Translated: 111; Mature: 110
Protein sequence:
>111_residues MAGVNNPDTVQKMVDFAIEKFGAVDIAVSNISLEKRQNFLDISLKDWHEVIKTNLNSAFYLAKAIIPGMKARRWGRIIYI SGYYGSIGTLYQAHNVTCKGGLNAFAKAIAT
Sequences:
>Translated_111_residues MAGVNNPDTVQKMVDFAIEKFGAVDIAVSNISLEKRQNFLDISLKDWHEVIKTNLNSAFYLAKAIIPGMKARRWGRIIYI SGYYGSIGTLYQAHNVTCKGGLNAFAKAIAT >Mature_110_residues AGVNNPDTVQKMVDFAIEKFGAVDIAVSNISLEKRQNFLDISLKDWHEVIKTNLNSAFYLAKAIIPGMKARRWGRIIYIS GYYGSIGTLYQAHNVTCKGGLNAFAKAIAT
Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]
Homologues:
Organism=Escherichia coli, GI1787335, Length=110, Percent_Identity=33.6363636363636, Blast_Score=76, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011284 - InterPro: IPR002198 - InterPro: IPR002347 - InterPro: IPR016040 - InterPro: IPR020904 [H]
Pfam domain/function: PF00106 adh_short [H]
EC number: =1.1.1.100 [H]
Molecular weight: Translated: 12255; Mature: 12124
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVNNPDTVQKMVDFAIEKFGAVDIAVSNISLEKRQNFLDISLKDWHEVIKTNLNSAFY CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCEEECCHHHHHHHHHHCCCHHHH LAKAIIPGMKARRWGRIIYISGYYGSIGTLYQAHNVTCKGGLNAFAKAIAT HHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCCCEECCCHHHHHHHHCC >Mature Secondary Structure AGVNNPDTVQKMVDFAIEKFGAVDIAVSNISLEKRQNFLDISLKDWHEVIKTNLNSAFY CCCCCHHHHHHHHHHHHHHCCCCEEEEECCCHHHHCCEEECCHHHHHHHHHHCCCHHHH LAKAIIPGMKARRWGRIIYISGYYGSIGTLYQAHNVTCKGGLNAFAKAIAT HHHHHHCCCCCCCCCCEEEEECCCCCHHHHHHCCCCEECCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]