Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113477204
Identifier: 113477204
GI number: 113477204
Start: 5736617
End: 5736991
Strand: Reverse
Name: 113477204
Synonym: Tery_3738
Alternate gene names: NA
Gene position: 5736991-5736617 (Counterclockwise)
Preceding gene: 113477205
Following gene: 113477201
Centisome position: 74.02
GC content: 26.13
Gene sequence:
>375_bases ATGAATAAAACTTTAGAGTACATTCATAATTATCCGAAAGAAATAAAAAGAATTATAGGGATTACTTATGAACAGCTAAC ACAATTAATAGAAAATGCAATTATCAAAGAATCAGAAAATTTCCAGGTAATTGCCGAGAAAGAAATAAGATTAATTAAAC CAGGTGGAGGCAGAAAAAAGACTTTAACTAAAACAGACGAAATATTTTTAACGCTATATTATTTACATCATATACCAAGT TTTCAATTATTAGGAATAAATTTTGGAGTTAGTGAATCAACAGCCAATAATATATTCCATTACTGGATAAATATTTTACC AGATTTATTACCAGCTAGTTTATTAGAACAAGTCAAAAAAAAGAAGATGAATTAG
Upstream 100 bases:
>100_bases ACTGAAAATACTATGGAGTTTGTTAAATAGACATCTCCAAAATAGAAAATAAGATAAGATTGTCATGTTCATTTATAATT TTATTTAGGTAGCTATACCA
Downstream 100 bases:
>100_bases AATGGGTAAAAGAAGCGTTAATGGAATTAGAATTAATAGTAGATAGCTCAGAACAAAGTAGAGAAAGACCAAAATAATCT GAAAAACCAGAAAAATATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MNKTLEYIHNYPKEIKRIIGITYEQLTQLIENAIIKESENFQVIAEKEIRLIKPGGGRKKTLTKTDEIFLTLYYLHHIPS FQLLGINFGVSESTANNIFHYWINILPDLLPASLLEQVKKKKMN
Sequences:
>Translated_124_residues MNKTLEYIHNYPKEIKRIIGITYEQLTQLIENAIIKESENFQVIAEKEIRLIKPGGGRKKTLTKTDEIFLTLYYLHHIPS FQLLGINFGVSESTANNIFHYWINILPDLLPASLLEQVKKKKMN >Mature_124_residues MNKTLEYIHNYPKEIKRIIGITYEQLTQLIENAIIKESENFQVIAEKEIRLIKPGGGRKKTLTKTDEIFLTLYYLHHIPS FQLLGINFGVSESTANNIFHYWINILPDLLPASLLEQVKKKKMN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14458; Mature: 14458
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKTLEYIHNYPKEIKRIIGITYEQLTQLIENAIIKESENFQVIAEKEIRLIKPGGGRKK CCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCC TLTKTDEIFLTLYYLHHIPSFQLLGINFGVSESTANNIFHYWINILPDLLPASLLEQVKK CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKMN HCCC >Mature Secondary Structure MNKTLEYIHNYPKEIKRIIGITYEQLTQLIENAIIKESENFQVIAEKEIRLIKPGGGRKK CCCHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCEEEECCCCCCCC TLTKTDEIFLTLYYLHHIPSFQLLGINFGVSESTANNIFHYWINILPDLLPASLLEQVKK CCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KKMN HCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA