Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113477205
Identifier: 113477205
GI number: 113477205
Start: 5737132
End: 5737263
Strand: Reverse
Name: 113477205
Synonym: Tery_3739
Alternate gene names: NA
Gene position: 5737263-5737132 (Counterclockwise)
Preceding gene: 113477210
Following gene: 113477204
Centisome position: 74.03
GC content: 25.76
Gene sequence:
>132_bases ATGGTTCACGAATGTCATTTATTATGGGTTTATCTCCTAAATTCTTCTTGGGGAATAAAAGATAAACAAATAGAAATTCC TATTAAAAATGAAAGAGAAAGACAAACTTATTATGGAGCAAATTATTATTAA
Upstream 100 bases:
>100_bases CGGCTAAAAATGATGAATTAGTGAAAGCAAAAAAAAAGAAATAGAGAAACTATTGGTCACATGGCAATCATAAATAAAAG CTGAAAAGTTTGTAATATTT
Downstream 100 bases:
>100_bases ACTGAGGAATTTATTGTGCAATAATTAAAGAAGTGGAAAGACTGAAAATACTATGGAGTTTGTTAAATAGACATCTCCAA AATAGAAAATAAGATAAGAT
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 43
Protein sequence:
>43_residues MVHECHLLWVYLLNSSWGIKDKQIEIPIKNERERQTYYGANYY
Sequences:
>Translated_43_residues MVHECHLLWVYLLNSSWGIKDKQIEIPIKNERERQTYYGANYY >Mature_43_residues MVHECHLLWVYLLNSSWGIKDKQIEIPIKNERERQTYYGANYY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5303; Mature: 5303
Theoretical pI: Translated: 7.51; Mature: 7.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVHECHLLWVYLLNSSWGIKDKQIEIPIKNERERQTYYGANYY CCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCEEECCCCC >Mature Secondary Structure MVHECHLLWVYLLNSSWGIKDKQIEIPIKNERERQTYYGANYY CCCCCEEEEEEEECCCCCCCCCEEEECCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA