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The map label for this gene is soj [H]

Identifier: 113477141

GI number: 113477141

Start: 5627133

End: 5628203

Strand: Reverse

Name: soj [H]

Synonym: Tery_3667

Alternate gene names: 113477141

Gene position: 5628203-5627133 (Counterclockwise)

Preceding gene: 113477145

Following gene: 113477140

Centisome position: 72.62

GC content: 35.29

Gene sequence:

>1071_bases
ATGGTTCAAAAAATTGCCCTATTTAATCATAAAGGTGGAGTTAGCAAAACTACAACTGCCTTTAATTTAGGCTGGATGTT
AGCTTCAAAAGGTAAAACAGTTATCCTTGCCGATACAGACCCACAGTGTAATTTGACTGGAGTCAGCTTGGGAGAAGGAA
CTGAGGACGACGAAAAAAGAATAGAAACAATTTATAATACAGGTTCAAATATAAAGACAGGTTTAGCTCCAGCTTTTGAA
GCACAACCAAGAGCAATTGAAGCAATTGACTGTATTCCGATCATAGGTCAGGAAAGATTGTTTATACTACCTGGTCATGT
TGGACTTGCCGAATACGAAGTAACACTGGGTATTGCTCAAGAATTAAGTGGTTCAATAGCAGCTCTTAAAAACGTACCAG
GTGCCTTGACTGATTTATTTAATAAAACTGCACTCAAATATAACGCTGACTATATTATAATTGATATGAGTCCCAGCTTA
GGCTCAATTAATCAGAATTTATTAATGACCAGTAATTTTTTCTTAGTTCCTACTACTGCTGATTTTTTCTCTTTGATGGC
AATTGACTCTCTAACAAAAGTGATGCCAAAGTGGCATGCTTGGGCTAAGAAAGCAAGTTCACTTCCAATTCTCAAAGATG
CTAACTATCCTTTTCCTGATGTCAATTTAAGTTTTCTCGGAACTATTGTTCAAAACTATCGAATTATACGTGGGAAAGAA
ACTGCTGCTTTTCAAATATGGATTGAGAAAATACAAAACACTGTTTCTAATAAACTAGCTCCAGTATTAGAACAAAATCA
AATGTTGTTAGAAAAAACAGTTTATCGTAGTCAAGGAATAGAAGATAATTACACCTTAACAAAAATTTCTAACTTCAATA
GTCTAATTGCACTATCTCAAGAACACCGAACACCAGTTTATGCTCTGACACCTGAACAGTTAGGCCAAACAGGAGTTGTT
TTGCGGAATAATCAAAACAAACAAAAAGAATTTCGAGAAACCTTTTCACAACTGGCAGAAAAAATTATTGGACTAACCAC
TTCCCATGCAGTCAGTACTCAATCAGTTTAA

Upstream 100 bases:

>100_bases
GAAAAACCCAACAAGCACTTTATTTTACCTGATTTCCCAACAACTCTATTGTGCTACCCTCATGGTATACTCAAATGTAT
TGAAGAAAAGGTGATTTACA

Downstream 100 bases:

>100_bases
TATTAGCATTCATCGCGTTCGAGAATTGATAGCCCTTCACAATTCACTCAAAACTCAAGCTACTAATACTTTATATCTAT
CAGATATTCTCAGAGCAGCT

Product: regulatory protein CII

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 356; Mature: 356

Protein sequence:

>356_residues
MVQKIALFNHKGGVSKTTTAFNLGWMLASKGKTVILADTDPQCNLTGVSLGEGTEDDEKRIETIYNTGSNIKTGLAPAFE
AQPRAIEAIDCIPIIGQERLFILPGHVGLAEYEVTLGIAQELSGSIAALKNVPGALTDLFNKTALKYNADYIIIDMSPSL
GSINQNLLMTSNFFLVPTTADFFSLMAIDSLTKVMPKWHAWAKKASSLPILKDANYPFPDVNLSFLGTIVQNYRIIRGKE
TAAFQIWIEKIQNTVSNKLAPVLEQNQMLLEKTVYRSQGIEDNYTLTKISNFNSLIALSQEHRTPVYALTPEQLGQTGVV
LRNNQNKQKEFRETFSQLAEKIIGLTTSHAVSTQSV

Sequences:

>Translated_356_residues
MVQKIALFNHKGGVSKTTTAFNLGWMLASKGKTVILADTDPQCNLTGVSLGEGTEDDEKRIETIYNTGSNIKTGLAPAFE
AQPRAIEAIDCIPIIGQERLFILPGHVGLAEYEVTLGIAQELSGSIAALKNVPGALTDLFNKTALKYNADYIIIDMSPSL
GSINQNLLMTSNFFLVPTTADFFSLMAIDSLTKVMPKWHAWAKKASSLPILKDANYPFPDVNLSFLGTIVQNYRIIRGKE
TAAFQIWIEKIQNTVSNKLAPVLEQNQMLLEKTVYRSQGIEDNYTLTKISNFNSLIALSQEHRTPVYALTPEQLGQTGVV
LRNNQNKQKEFRETFSQLAEKIIGLTTSHAVSTQSV
>Mature_356_residues
MVQKIALFNHKGGVSKTTTAFNLGWMLASKGKTVILADTDPQCNLTGVSLGEGTEDDEKRIETIYNTGSNIKTGLAPAFE
AQPRAIEAIDCIPIIGQERLFILPGHVGLAEYEVTLGIAQELSGSIAALKNVPGALTDLFNKTALKYNADYIIIDMSPSL
GSINQNLLMTSNFFLVPTTADFFSLMAIDSLTKVMPKWHAWAKKASSLPILKDANYPFPDVNLSFLGTIVQNYRIIRGKE
TAAFQIWIEKIQNTVSNKLAPVLEQNQMLLEKTVYRSQGIEDNYTLTKISNFNSLIALSQEHRTPVYALTPEQLGQTGVV
LRNNQNKQKEFRETFSQLAEKIIGLTTSHAVSTQSV

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 39215; Mature: 39215

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQKIALFNHKGGVSKTTTAFNLGWMLASKGKTVILADTDPQCNLTGVSLGEGTEDDEKR
CCCEEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCHHHHH
IETIYNTGSNIKTGLAPAFEAQPRAIEAIDCIPIIGQERLFILPGHVGLAEYEVTLGIAQ
HHHHHCCCCCCCCCCCCCCCCCCCEEEHCCEEEECCCCEEEEECCCCCCEEEEEEEEHHH
ELSGSIAALKNVPGALTDLFNKTALKYNADYIIIDMSPSLGSINQNLLMTSNFFLVPTTA
HHCCHHHHHHCCCHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCEEEECCEEEEECHH
DFFSLMAIDSLTKVMPKWHAWAKKASSLPILKDANYPFPDVNLSFLGTIVQNYRIIRGKE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHCCEEEECCC
TAAFQIWIEKIQNTVSNKLAPVLEQNQMLLEKTVYRSQGIEDNYTLTKISNFNSLIALSQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECC
EHRTPVYALTPEQLGQTGVVLRNNQNKQKEFRETFSQLAEKIIGLTTSHAVSTQSV
CCCCCEEEECHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MVQKIALFNHKGGVSKTTTAFNLGWMLASKGKTVILADTDPQCNLTGVSLGEGTEDDEKR
CCCEEEEEECCCCCCCCEEEEEEEEEEECCCCEEEEECCCCCCEEEEEECCCCCCHHHHH
IETIYNTGSNIKTGLAPAFEAQPRAIEAIDCIPIIGQERLFILPGHVGLAEYEVTLGIAQ
HHHHHCCCCCCCCCCCCCCCCCCCEEEHCCEEEECCCCEEEEECCCCCCEEEEEEEEHHH
ELSGSIAALKNVPGALTDLFNKTALKYNADYIIIDMSPSLGSINQNLLMTSNFFLVPTTA
HHCCHHHHHHCCCHHHHHHHHHHEEEECCCEEEEECCCCCCCCCCCEEEECCEEEEECHH
DFFSLMAIDSLTKVMPKWHAWAKKASSLPILKDANYPFPDVNLSFLGTIVQNYRIIRGKE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHHHCCEEEECCC
TAAFQIWIEKIQNTVSNKLAPVLEQNQMLLEKTVYRSQGIEDNYTLTKISNFNSLIALSQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEECC
EHRTPVYALTPEQLGQTGVVLRNNQNKQKEFRETFSQLAEKIIGLTTSHAVSTQSV
CCCCCEEEECHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]