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The map label for this gene is csoR [H]

Identifier: 113477018

GI number: 113477018

Start: 5419868

End: 5420236

Strand: Reverse

Name: csoR [H]

Synonym: Tery_3516

Alternate gene names: 113477018

Gene position: 5420236-5419868 (Counterclockwise)

Preceding gene: 113477021

Following gene: 113477017

Centisome position: 69.94

GC content: 35.23

Gene sequence:

>369_bases
ATGGTGATATCTAACAAACAAAAAAAACAGATTGGTAGTCATACACTTGAGAAAGATATAATTTCTGAAGATCACCATCA
TTCTTCTGCTCATCCTCATGTTCACAGTGAAGAATCTCTGAAACGTCTGATAAATAGATTATCGAGAATTGAAGGGCACG
TTAGAGGGATTAAAACTATGATCAAAGATCATCGGGCTTGTCCTGATGTTTTAATACAAATAGCTGCAGTTCGTGGTGCT
TTAGACCGAGTAGCTCGTATAGTTTTAGATAATCATTTATCTGATTGTATTGTTCGGGCAAATCAAGATGGAGATATTGA
TGTTGAAATTGCTGCTTTAAAGTCGGCTTTAGATAGATTTTTACCCTAA

Upstream 100 bases:

>100_bases
TCGACAAAAATTTAACAATTTCATAGTATTCACATTTGAATGTGTTAAGTTTGGTGTTATAATATAGTTAACAATATATT
ATTATAATATAAATAAGTTT

Downstream 100 bases:

>100_bases
ATTATTTTCACTTAAATTCTATCCATAGTTCTAGAATAACTTATAAATACTAATCACTAAATTTATCAATAATTATAGTT
AGATAAATATATAAAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 122; Mature: 122

Protein sequence:

>122_residues
MVISNKQKKQIGSHTLEKDIISEDHHHSSAHPHVHSEESLKRLINRLSRIEGHVRGIKTMIKDHRACPDVLIQIAAVRGA
LDRVARIVLDNHLSDCIVRANQDGDIDVEIAALKSALDRFLP

Sequences:

>Translated_122_residues
MVISNKQKKQIGSHTLEKDIISEDHHHSSAHPHVHSEESLKRLINRLSRIEGHVRGIKTMIKDHRACPDVLIQIAAVRGA
LDRVARIVLDNHLSDCIVRANQDGDIDVEIAALKSALDRFLP
>Mature_122_residues
MVISNKQKKQIGSHTLEKDIISEDHHHSSAHPHVHSEESLKRLINRLSRIEGHVRGIKTMIKDHRACPDVLIQIAAVRGA
LDRVARIVLDNHLSDCIVRANQDGDIDVEIAALKSALDRFLP

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 13684; Mature: 13684

Theoretical pI: Translated: 8.31; Mature: 8.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVISNKQKKQIGSHTLEKDIISEDHHHSSAHPHVHSEESLKRLINRLSRIEGHVRGIKTM
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKDHRACPDVLIQIAAVRGALDRVARIVLDNHLSDCIVRANQDGDIDVEIAALKSALDRF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LP
CC
>Mature Secondary Structure
MVISNKQKKQIGSHTLEKDIISEDHHHSSAHPHVHSEESLKRLINRLSRIEGHVRGIKTM
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IKDHRACPDVLIQIAAVRGALDRVARIVLDNHLSDCIVRANQDGDIDVEIAALKSALDRF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
LP
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]