Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113477021

Identifier: 113477021

GI number: 113477021

Start: 5422333

End: 5423190

Strand: Reverse

Name: 113477021

Synonym: Tery_3519

Alternate gene names: NA

Gene position: 5423190-5422333 (Counterclockwise)

Preceding gene: 113477023

Following gene: 113477018

Centisome position: 69.98

GC content: 29.72

Gene sequence:

>858_bases
ATGAAAAATAACCAAAATTTTTGGCAAGTAATCTTGAATTTGAGCTTAATTACAATTGTTTTACTTTGGATTAATGATGC
AGCAGCAGAAAACCTTGCTGAGAGAATCGGTAATTTTCCTAACTGGGAAAATAAACCATTAATTAGTGCTCCTAAAACAG
ATTTAATTTATCCAGACTGGATGGCAGGAAATTGGAATGTAGAAAGTACTTTAATAGATATGGTCGCTCCATTAGCTCCA
AAAATTATTACACCAGGTTTTGAAAAAAATCGTCAATATTTGTATCAACCAGTAAATTTTCAAGTTAAATTTATTAAGCT
TAAATCAAGCTTAAATACCAAAGAAATATCGGAACAAAAATTAATAAATTTTCCTACATCTTGGTCTTCTGTGATTAATA
ATAACAAAATTGAAAAATTAGATTTACCTCCAGAAGCAGTTATCGCTGACCGAGAATTTAATGGGTTGAATATTGGCAAA
GCATTTTTAGGTGATGATGCCATTTTATCTGTTAAAATCAACCAATATAATCCTAATCGTCAGACAACTATTTTAGCAGA
TAATTTAGAGTTAGTTTCAATTATTACTAGTCGCGCTAGCGAACAATTAAACCCAGATAATTTTATTACCTGTGAAATAA
CTCAACAGTTATTTCAGGGGGAGAAAATGATTTATTTAAATGAGGTAGAAACAACTACAGATTATCATCATATTATTGAT
GAATATCAAGGAGAAATAATTGAGGCAAATCAGATAACAGCAATTTATTTATCTCCTCAAGATCCTAATTATTTTTTAGT
AGCAAATCACCCTGTAGCATTGTATCGTTATCAATTAAGATTATCTGCTGTTCAATAA

Upstream 100 bases:

>100_bases
ACCTAAAACCTAAAACCTAAAACTTGAACATAATTACTAATCGGGACGTTGTATGTAACTTCCCTAACTACTCTCTACTA
CCTACTCCCTAATCCCTATT

Downstream 100 bases:

>100_bases
AACTTATAAAAATTCCTAATTTAGGGTAATACAGTTCAGTTCAGTTAAGGATTTTTTTGCCATTCTCTAATCTGAAAAGT
TCATCTAATGGTTCCAGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MKNNQNFWQVILNLSLITIVLLWINDAAAENLAERIGNFPNWENKPLISAPKTDLIYPDWMAGNWNVESTLIDMVAPLAP
KIITPGFEKNRQYLYQPVNFQVKFIKLKSSLNTKEISEQKLINFPTSWSSVINNNKIEKLDLPPEAVIADREFNGLNIGK
AFLGDDAILSVKINQYNPNRQTTILADNLELVSIITSRASEQLNPDNFITCEITQQLFQGEKMIYLNEVETTTDYHHIID
EYQGEIIEANQITAIYLSPQDPNYFLVANHPVALYRYQLRLSAVQ

Sequences:

>Translated_285_residues
MKNNQNFWQVILNLSLITIVLLWINDAAAENLAERIGNFPNWENKPLISAPKTDLIYPDWMAGNWNVESTLIDMVAPLAP
KIITPGFEKNRQYLYQPVNFQVKFIKLKSSLNTKEISEQKLINFPTSWSSVINNNKIEKLDLPPEAVIADREFNGLNIGK
AFLGDDAILSVKINQYNPNRQTTILADNLELVSIITSRASEQLNPDNFITCEITQQLFQGEKMIYLNEVETTTDYHHIID
EYQGEIIEANQITAIYLSPQDPNYFLVANHPVALYRYQLRLSAVQ
>Mature_285_residues
MKNNQNFWQVILNLSLITIVLLWINDAAAENLAERIGNFPNWENKPLISAPKTDLIYPDWMAGNWNVESTLIDMVAPLAP
KIITPGFEKNRQYLYQPVNFQVKFIKLKSSLNTKEISEQKLINFPTSWSSVINNNKIEKLDLPPEAVIADREFNGLNIGK
AFLGDDAILSVKINQYNPNRQTTILADNLELVSIITSRASEQLNPDNFITCEITQQLFQGEKMIYLNEVETTTDYHHIID
EYQGEIIEANQITAIYLSPQDPNYFLVANHPVALYRYQLRLSAVQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32630; Mature: 32630

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNQNFWQVILNLSLITIVLLWINDAAAENLAERIGNFPNWENKPLISAPKTDLIYPDW
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
MAGNWNVESTLIDMVAPLAPKIITPGFEKNRQYLYQPVNFQVKFIKLKSSLNTKEISEQK
CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCEEECCCCEEEEEEEEECCCCHHHHCHHH
LINFPTSWSSVINNNKIEKLDLPPEAVIADREFNGLNIGKAFLGDDAILSVKINQYNPNR
HCCCCCCHHHHHCCCCEEEECCCCHHEEECCCCCCCCCCHHHCCCCEEEEEEEECCCCCC
QTTILADNLELVSIITSRASEQLNPDNFITCEITQQLFQGEKMIYLNEVETTTDYHHIID
CEEEEECCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCEEEEEECCCCCHHHHHHHH
EYQGEIIEANQITAIYLSPQDPNYFLVANHPVALYRYQLRLSAVQ
HHCCCEEECCCEEEEEECCCCCCEEEEECCCEEEEEEEEEEEECC
>Mature Secondary Structure
MKNNQNFWQVILNLSLITIVLLWINDAAAENLAERIGNFPNWENKPLISAPKTDLIYPDW
CCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
MAGNWNVESTLIDMVAPLAPKIITPGFEKNRQYLYQPVNFQVKFIKLKSSLNTKEISEQK
CCCCCCHHHHHHHHHHHCCCHHCCCCCCCCCCEEECCCCEEEEEEEEECCCCHHHHCHHH
LINFPTSWSSVINNNKIEKLDLPPEAVIADREFNGLNIGKAFLGDDAILSVKINQYNPNR
HCCCCCCHHHHHCCCCEEEECCCCHHEEECCCCCCCCCCHHHCCCCEEEEEEEECCCCCC
QTTILADNLELVSIITSRASEQLNPDNFITCEITQQLFQGEKMIYLNEVETTTDYHHIID
CEEEEECCCHHHHHHHHHHHCCCCCCCEEEEHHHHHHHCCCEEEEEECCCCCHHHHHHHH
EYQGEIIEANQITAIYLSPQDPNYFLVANHPVALYRYQLRLSAVQ
HHCCCEEECCCEEEEEECCCCCCEEEEECCCEEEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA