The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476421

Identifier: 113476421

GI number: 113476421

Start: 4406496

End: 4406747

Strand: Reverse

Name: 113476421

Synonym: Tery_2835

Alternate gene names: NA

Gene position: 4406747-4406496 (Counterclockwise)

Preceding gene: 113476424

Following gene: 113476420

Centisome position: 56.86

GC content: 34.13

Gene sequence:

>252_bases
ATGGATACCCAGTTCATTAACATTGGTTTTGGTAATATTGTTTCTGCTAATCGAGTTGTGACAATTGTTAGTCCAGAATC
AGCTCCTATTAAGCGGATAATTAATGATGGACGAGAAAGAGGCCAATTAATTGATGCTACTTATGGTCGACGCACTAGAG
CTGTAATTATTACAGATTCTAATCATGTTATTCTTTCTTCTATTCAACCTGAGACAGTGGCAAATAGATTTTTATTTAAT
AAAGATGACTGA

Upstream 100 bases:

>100_bases
AAGCTCTTGAGCTTTGTGAAGTTGGGGAATGTCCCCATGTCGCAATTGCCCATTTATTTTCAGGAAGATTTCATTTCAAT
CTATGTCATTATAATCTCTT

Downstream 100 bases:

>100_bases
TGGCTAATTTTGAAAGGCATAAGGCTTCAGTACTACCCAGAACTCAGAAGTGAAATTCACAAGAGATAAGAAATTTGAGA
ACTTGAGGATATCTTAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MDTQFINIGFGNIVSANRVVTIVSPESAPIKRIINDGRERGQLIDATYGRRTRAVIITDSNHVILSSIQPETVANRFLFN
KDD

Sequences:

>Translated_83_residues
MDTQFINIGFGNIVSANRVVTIVSPESAPIKRIINDGRERGQLIDATYGRRTRAVIITDSNHVILSSIQPETVANRFLFN
KDD
>Mature_83_residues
MDTQFINIGFGNIVSANRVVTIVSPESAPIKRIINDGRERGQLIDATYGRRTRAVIITDSNHVILSSIQPETVANRFLFN
KDD

Specific function: Unknown

COG id: COG2052

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0296 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2835_TRIEI (Q110R5)

Other databases:

- EMBL:   CP000393
- RefSeq:   YP_722482.1
- STRING:   Q110R5
- GeneID:   4245138
- GenomeReviews:   CP000393_GR
- KEGG:   ter:Tery_2835
- NMPDR:   fig|203124.1.peg.4768
- eggNOG:   COG2052
- HOGENOM:   HBG286498
- OMA:   KRIISDA
- ProtClustDB:   PRK04323
- BioCyc:   TERY203124:TERY_2835-MONOMER
- HAMAP:   MF_01503
- InterPro:   IPR007169
- ProDom:   PD063023

Pfam domain/function: PF04025 DUF370

EC number: NA

Molecular weight: Translated: 9258; Mature: 9258

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQFINIGFGNIVSANRVVTIVSPESAPIKRIINDGRERGQLIDATYGRRTRAVIITDS
CCCEEEECCCCCEECCCEEEEEECCCCCCHHHHHHCCCCCCEEEECCCCCCEEEEEEECC
NHVILSSIQPETVANRFLFNKDD
CEEEEEECCCCHHHHHEEEECCC
>Mature Secondary Structure
MDTQFINIGFGNIVSANRVVTIVSPESAPIKRIINDGRERGQLIDATYGRRTRAVIITDS
CCCEEEECCCCCEECCCEEEEEECCCCCCHHHHHHCCCCCCEEEECCCCCCEEEEEEECC
NHVILSSIQPETVANRFLFNKDD
CEEEEEECCCCHHHHHEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA