Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is yeiG [C]
Identifier: 113476424
GI number: 113476424
Start: 4410979
End: 4411827
Strand: Reverse
Name: yeiG [C]
Synonym: Tery_2838
Alternate gene names: 113476424
Gene position: 4411827-4410979 (Counterclockwise)
Preceding gene: 113476426
Following gene: 113476421
Centisome position: 56.93
GC content: 33.92
Gene sequence:
>849_bases ATGTCTACAAAAATTAAATTGGTTAAAAAACATCAATGCTTTGGTGGTACAGTAAGCTATTATTTCCACTCATCTTCCAC CTGTAATACTGAAATGCGTTTCTCAATTTACCAACCATCGCTAGCAAAATCACAACCTCTTCCTATTCTGTATTTTCTCT CAGGTTTAACCTGTACTGAAGAGAACTTTATGGCTAAAGCAGGAGCGCAACAATTTGCTAATAAATATGGGTTAATTTTA GTTGTACCAGATACAAGCCCACGAAATACTGGTACTTTTGGAGAGGATGATGATTGGGATTTAGGTACAGGTGCAGGATT CTATATTAACGCTACTGTAGAACCTTGGAAAAAGCACTATCAAATGTATAGTTATGTCGTCGAAGAACTACCAGAAATTA TTGCCAAAAATTTTCCTGTACAACCAGATAAGCAAAGTATTTTCGGTCACTCTATGGGAGGTCATGGAGCACTAATTTGT GCTTTGAAAAATCCTGAAAAATATCAATCTGTTTCCGCCTTTGCTCCAATTGCAGCACCTATGCGTTGTTATTGGGGAAA GAAAGCTTTTAGGAATTATTTAGGTACAAACACAAAAAATTGGCGTGATTATGATGCTAGTGAATTAGTTTTAACTTATA AGTATAATCGTCCAATTTTAATTGATGTAGGAACTGTAGATCCTTTTTTAGCTCAAAAGCAATTACTCCCAGAAGTGTTT GAAAGTGCTTGTCAAAAAGTTGGTTTACCACTAACTTTAAGAATGCTAAAAAATTATGATCATAGCTATTATTTCATTAC ATCTTTTATTGAAGATCATATTCGTTATCATTCTGAATTTTTAAACTGA
Upstream 100 bases:
>100_bases TCCCTTATGCGCTTTCTCTTATTCAAGGAAATAAAAAAAATCATGTTTCAAACCTCCGGCTTCAGAAGTCAGCATTAATA ATAGAAAACTGAAATGACTT
Downstream 100 bases:
>100_bases ATCAAAACTATAAGCACTTAAACACTCATTGCAGGCCTCGGCTAATTTGATGTGAGAGATATAGTATAAGTAATTCGGCT TGGAAAAATGTGTAGTTAAT
Product: carboxylesterase
Products: NA
Alternate protein names: FGH [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MSTKIKLVKKHQCFGGTVSYYFHSSSTCNTEMRFSIYQPSLAKSQPLPILYFLSGLTCTEENFMAKAGAQQFANKYGLIL VVPDTSPRNTGTFGEDDDWDLGTGAGFYINATVEPWKKHYQMYSYVVEELPEIIAKNFPVQPDKQSIFGHSMGGHGALIC ALKNPEKYQSVSAFAPIAAPMRCYWGKKAFRNYLGTNTKNWRDYDASELVLTYKYNRPILIDVGTVDPFLAQKQLLPEVF ESACQKVGLPLTLRMLKNYDHSYYFITSFIEDHIRYHSEFLN
Sequences:
>Translated_282_residues MSTKIKLVKKHQCFGGTVSYYFHSSSTCNTEMRFSIYQPSLAKSQPLPILYFLSGLTCTEENFMAKAGAQQFANKYGLIL VVPDTSPRNTGTFGEDDDWDLGTGAGFYINATVEPWKKHYQMYSYVVEELPEIIAKNFPVQPDKQSIFGHSMGGHGALIC ALKNPEKYQSVSAFAPIAAPMRCYWGKKAFRNYLGTNTKNWRDYDASELVLTYKYNRPILIDVGTVDPFLAQKQLLPEVF ESACQKVGLPLTLRMLKNYDHSYYFITSFIEDHIRYHSEFLN >Mature_281_residues STKIKLVKKHQCFGGTVSYYFHSSSTCNTEMRFSIYQPSLAKSQPLPILYFLSGLTCTEENFMAKAGAQQFANKYGLILV VPDTSPRNTGTFGEDDDWDLGTGAGFYINATVEPWKKHYQMYSYVVEELPEIIAKNFPVQPDKQSIFGHSMGGHGALICA LKNPEKYQSVSAFAPIAAPMRCYWGKKAFRNYLGTNTKNWRDYDASELVLTYKYNRPILIDVGTVDPFLAQKQLLPEVFE SACQKVGLPLTLRMLKNYDHSYYFITSFIEDHIRYHSEFLN
Specific function: Serine hydrolase involved in the detoxification of formaldehyde. Hydrolyzes S-formylglutathione to glutathione and formate [H]
COG id: COG0627
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the esterase D family [H]
Homologues:
Organism=Homo sapiens, GI33413400, Length=279, Percent_Identity=55.1971326164875, Blast_Score=336, Evalue=1e-92, Organism=Escherichia coli, GI1788477, Length=279, Percent_Identity=50.8960573476703, Blast_Score=276, Evalue=1e-75, Organism=Escherichia coli, GI1786551, Length=278, Percent_Identity=45.6834532374101, Blast_Score=267, Evalue=5e-73, Organism=Caenorhabditis elegans, GI17510185, Length=279, Percent_Identity=49.4623655913978, Blast_Score=271, Evalue=3e-73, Organism=Saccharomyces cerevisiae, GI6322393, Length=297, Percent_Identity=38.3838383838384, Blast_Score=204, Evalue=9e-54, Organism=Drosophila melanogaster, GI45551932, Length=280, Percent_Identity=50.7142857142857, Blast_Score=296, Evalue=1e-80, Organism=Drosophila melanogaster, GI24648347, Length=280, Percent_Identity=50.7142857142857, Blast_Score=296, Evalue=1e-80,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000801 - InterPro: IPR014186 [H]
Pfam domain/function: PF00756 Esterase [H]
EC number: =3.1.2.12 [H]
Molecular weight: Translated: 32144; Mature: 32013
Theoretical pI: Translated: 8.11; Mature: 8.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTKIKLVKKHQCFGGTVSYYFHSSSTCNTEMRFSIYQPSLAKSQPLPILYFLSGLTCTE CCCCEEEEEHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEECC ENFMAKAGAQQFANKYGLILVVPDTSPRNTGTFGEDDDWDLGTGAGFYINATVEPWKKHY HHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHH QMYSYVVEELPEIIAKNFPVQPDKQSIFGHSMGGHGALICALKNPEKYQSVSAFAPIAAP HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHH MRCYWGKKAFRNYLGTNTKNWRDYDASELVLTYKYNRPILIDVGTVDPFLAQKQLLPEVF HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHH ESACQKVGLPLTLRMLKNYDHSYYFITSFIEDHIRYHSEFLN HHHHHHCCCCEEEHHHHCCCCCEEEHHHHHHHHHHHHHHHCC >Mature Secondary Structure STKIKLVKKHQCFGGTVSYYFHSSSTCNTEMRFSIYQPSLAKSQPLPILYFLSGLTCTE CCCEEEEEHHCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCEECC ENFMAKAGAQQFANKYGLILVVPDTSPRNTGTFGEDDDWDLGTGAGFYINATVEPWKKHY HHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHH QMYSYVVEELPEIIAKNFPVQPDKQSIFGHSMGGHGALICALKNPEKYQSVSAFAPIAAP HHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHCCHHHH MRCYWGKKAFRNYLGTNTKNWRDYDASELVLTYKYNRPILIDVGTVDPFLAQKQLLPEVF HHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHHHHH ESACQKVGLPLTLRMLKNYDHSYYFITSFIEDHIRYHSEFLN HHHHHHCCCCEEEHHHHCCCCCEEEHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]