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The map label for this gene is 113476355

Identifier: 113476355

GI number: 113476355

Start: 4273670

End: 4274851

Strand: Reverse

Name: 113476355

Synonym: Tery_2760

Alternate gene names: NA

Gene position: 4274851-4273670 (Counterclockwise)

Preceding gene: 113476356

Following gene: 113476354

Centisome position: 55.16

GC content: 40.1

Gene sequence:

>1182_bases
ATGGCTGGCATTCCCCCTGAACTATATCAAAAATTGCGTCAATTTCTGTTAGACTGTGAACAATTTGAGAGCGATCGCGC
CCTTCAGTCTATTGTTTCCACTTATCAACCACTAAGACCTTGGCGTTTTTTACCCCAAGCCAACAGTATGGCCAGTAGAG
TAAACTTAGTAATTAGCTATTTACATAACAAATATCACAGTGACACCAAAGAAAATGCTCTTGTCTTACTGTTACGTCTC
TTAAAAGATTTAATCGAAGAAGAAGATCAACGTCACCAACAACTAGTCAATCTAATTATAGAACTGGAAAATGCTTTTGC
AGATAACTCAACTCTGGATAACCTTAAACCAGAAACCAAGACAGAAACTACAATTCGAGGCACAAAAAAAAGAAAGCTCG
AAGAAGAAAAACGTCAACCCATAAAAAATCGTTGGGCTTTTTTGGTAGGAGTCAACCGCTATAATGATCCAGGAGTTCAC
AAGTTAAAATTCTGTGTAAAAGATGTGCAAAAATTAGAAAAGAAACTCAAAGAACTTGGATACACAGTCATGTGTTTACA
TGATGATCTTGAATCTGATAGCCGCCGCTTCCCCATCCACAACAATATAGAAGCTGAATTAATTAACCTATGCAATATGG
TCGATGTAGATGACCTATTGCTGGTGTATTTTGCTTGTCACGGTAAACTTGGGCGCGATGAACAACCTATGCTCATAGTC
AGGGATACCCGTTTACCAACCATCGAAAAAACAGGTTTGTCTCTAGCCGACATAAAAAAATCCATGCATTCTAGCAAAGC
AAGACGTTTAGTACTGACATTGGATGCTTGTCATATGGGAGTCGAAACCGGACGAGGAATTGACGAGCCCCAATTCATTC
AAAATGCTTATGAATTAGCTGAAGGTTTTGCCTTAATTGCCGCGAGTACAGCACAGCAAAAAGCCCTAGAGTCACCAGAG
AAAAATTCTGGAGTCTTCACCCACTACCTAATAGAAGGACTCAGCGGTGATGCAGACCGGGAGAAAAAGGGTTTCGTGAC
TGTAGACGATCTTAAGACTTATGTGCTCCATAGTCTTCGTCGTTGGAGTATCGAGAATGATGAAGAAATTCAAGAACCAA
CTGCCAAGACAGAAGGACTAGGGGATATGATAGTTGCAGATTATCGCTATAGCCATGATTAA

Upstream 100 bases:

>100_bases
GTATCGCTCAATTAACTTGCTGGTTGAAATTCATCTCAGCGTTAAATTGTCCGATAATAGCGGCAGTCCTATAGGCAAAA
TTCCTTGATAGACTTATAAT

Downstream 100 bases:

>100_bases
ACAAAGATAATTATCAAAAACTAAACTTACAGCCCTTTTCAAATTGATAAACAACATCGCCATAACTAAAACTTTGTACG
GACCTTGCATCACAAAAATG

Product: peptidase C14, caspase catalytic subunit p20

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MAGIPPELYQKLRQFLLDCEQFESDRALQSIVSTYQPLRPWRFLPQANSMASRVNLVISYLHNKYHSDTKENALVLLLRL
LKDLIEEEDQRHQQLVNLIIELENAFADNSTLDNLKPETKTETTIRGTKKRKLEEEKRQPIKNRWAFLVGVNRYNDPGVH
KLKFCVKDVQKLEKKLKELGYTVMCLHDDLESDSRRFPIHNNIEAELINLCNMVDVDDLLLVYFACHGKLGRDEQPMLIV
RDTRLPTIEKTGLSLADIKKSMHSSKARRLVLTLDACHMGVETGRGIDEPQFIQNAYELAEGFALIAASTAQQKALESPE
KNSGVFTHYLIEGLSGDADREKKGFVTVDDLKTYVLHSLRRWSIENDEEIQEPTAKTEGLGDMIVADYRYSHD

Sequences:

>Translated_393_residues
MAGIPPELYQKLRQFLLDCEQFESDRALQSIVSTYQPLRPWRFLPQANSMASRVNLVISYLHNKYHSDTKENALVLLLRL
LKDLIEEEDQRHQQLVNLIIELENAFADNSTLDNLKPETKTETTIRGTKKRKLEEEKRQPIKNRWAFLVGVNRYNDPGVH
KLKFCVKDVQKLEKKLKELGYTVMCLHDDLESDSRRFPIHNNIEAELINLCNMVDVDDLLLVYFACHGKLGRDEQPMLIV
RDTRLPTIEKTGLSLADIKKSMHSSKARRLVLTLDACHMGVETGRGIDEPQFIQNAYELAEGFALIAASTAQQKALESPE
KNSGVFTHYLIEGLSGDADREKKGFVTVDDLKTYVLHSLRRWSIENDEEIQEPTAKTEGLGDMIVADYRYSHD
>Mature_392_residues
AGIPPELYQKLRQFLLDCEQFESDRALQSIVSTYQPLRPWRFLPQANSMASRVNLVISYLHNKYHSDTKENALVLLLRLL
KDLIEEEDQRHQQLVNLIIELENAFADNSTLDNLKPETKTETTIRGTKKRKLEEEKRQPIKNRWAFLVGVNRYNDPGVHK
LKFCVKDVQKLEKKLKELGYTVMCLHDDLESDSRRFPIHNNIEAELINLCNMVDVDDLLLVYFACHGKLGRDEQPMLIVR
DTRLPTIEKTGLSLADIKKSMHSSKARRLVLTLDACHMGVETGRGIDEPQFIQNAYELAEGFALIAASTAQQKALESPEK
NSGVFTHYLIEGLSGDADREKKGFVTVDDLKTYVLHSLRRWSIENDEEIQEPTAKTEGLGDMIVADYRYSHD

Specific function: Unknown

COG id: COG4249

COG function: function code R; Uncharacterized protein containing caspase domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 WD repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020472
- InterPro:   IPR011600
- InterPro:   IPR015943
- InterPro:   IPR001680
- InterPro:   IPR011046
- InterPro:   IPR019782
- InterPro:   IPR019775
- InterPro:   IPR017986
- InterPro:   IPR019781 [H]

Pfam domain/function: PF00656 Peptidase_C14; PF00400 WD40 [H]

EC number: NA

Molecular weight: Translated: 45126; Mature: 44995

Theoretical pI: Translated: 6.11; Mature: 6.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGIPPELYQKLRQFLLDCEQFESDRALQSIVSTYQPLRPWRFLPQANSMASRVNLVISY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LHNKYHSDTKENALVLLLRLLKDLIEEEDQRHQQLVNLIIELENAFADNSTLDNLKPETK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TETTIRGTKKRKLEEEKRQPIKNRWAFLVGVNRYNDPGVHKLKFCVKDVQKLEKKLKELG
CHHHHCCHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
YTVMCLHDDLESDSRRFPIHNNIEAELINLCNMVDVDDLLLVYFACHGKLGRDEQPMLIV
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEE
RDTRLPTIEKTGLSLADIKKSMHSSKARRLVLTLDACHMGVETGRGIDEPQFIQNAYELA
ECCCCCCHHHCCCHHHHHHHHHHHHHHCEEEEEEHHHHHCHHCCCCCCCHHHHHHHHHHH
EGFALIAASTAQQKALESPEKNSGVFTHYLIEGLSGDADREKKGFVTVDDLKTYVLHSLR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHH
RWSIENDEEIQEPTAKTEGLGDMIVADYRYSHD
HCCCCCCHHHHCCCHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure 
AGIPPELYQKLRQFLLDCEQFESDRALQSIVSTYQPLRPWRFLPQANSMASRVNLVISY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
LHNKYHSDTKENALVLLLRLLKDLIEEEDQRHQQLVNLIIELENAFADNSTLDNLKPETK
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
TETTIRGTKKRKLEEEKRQPIKNRWAFLVGVNRYNDPGVHKLKFCVKDVQKLEKKLKELG
CHHHHCCHHHHHHHHHHHCCHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
YTVMCLHDDLESDSRRFPIHNNIEAELINLCNMVDVDDLLLVYFACHGKLGRDEQPMLIV
CEEEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCEEEE
RDTRLPTIEKTGLSLADIKKSMHSSKARRLVLTLDACHMGVETGRGIDEPQFIQNAYELA
ECCCCCCHHHCCCHHHHHHHHHHHHHHCEEEEEEHHHHHCHHCCCCCCCHHHHHHHHHHH
EGFALIAASTAQQKALESPEKNSGVFTHYLIEGLSGDADREKKGFVTVDDLKTYVLHSLR
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHH
RWSIENDEEIQEPTAKTEGLGDMIVADYRYSHD
HCCCCCCHHHHCCCHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]