Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476354

Identifier: 113476354

GI number: 113476354

Start: 4271969

End: 4273429

Strand: Reverse

Name: 113476354

Synonym: Tery_2759

Alternate gene names: NA

Gene position: 4273429-4271969 (Counterclockwise)

Preceding gene: 113476355

Following gene: 113476349

Centisome position: 55.14

GC content: 41.27

Gene sequence:

>1461_bases
ATGATGCGCGGTCAAAAAACTATGATGGTACTATTGAGTCTAGCTCTAAACTTGGTATTGGTAGCACCTCCTGTGAAAGC
TGAACCAAAAGTTACCATAACCCCATCCAATTTAACCGTAGTAGGAACTAAATGTCCAGTTTTTTTTTACTGTCCTGTCC
TGAAGCGCCGTCTAGTTTTACAAACTAATCAGGCCATCGCAAACTTACAAATACTCAGCCTAGATTTGGATCGAACCGAT
GGAACCACCGTTTTACAAGGTAGCGCGATTAATCCAATTTTGTCCACAACCTCAGTGGAACCAAATCAACCACTGACTAT
CCCAGTTGAATTCAACTTAAACGATGCCAAAAGTGGTGAATTTAGTGGTGTTTTACTAGCCATCCATTCTGATGGACAAC
TGGTTATACCTATAATTGTACGAGTAAAAGATCATTGGCTGGGACCAATATTCCTCTTGCTATTAGGCGTTATGGTAAGT
ATTGGCATGTCTGCCTACCGTACTGATGGCAGAAACCGTGATGAAATTGTGGTGCTAGTTAGCCGCATTCGCACTCAGAT
GAAAGCTGACCCAGAACTAGTAAAATCATTTCAGGTAAAAATCAATGGATATCTAATTGATGTAGACACCGATTTAACAA
ACAAGCGATGGGATGAGGCAAAGCAAGCTGTAGCAAAAGCTCAAACAACTTGGGATAAATGGCGAAAAAGTAGAGAAGAC
TGGTTAGCTTTATCCGAATTTGAGTCTTCCTTTCTAGATCTAGATAATCTCACCACTGATGCTCCCTATGTACAAACAGT
AGGTAGCTACTTAGAGAATATTAAGCGACAAACAGCTGATAAAGAAAATCCCGAACAGTTGAGGAAAGAGTTAAATGATT
TGCGGCAACAACTGGTTCGTTACCTGGGAGGTGAAGCTAAACTAGAGAGATTCGATAATCTTAGAAATGAGTTAACTGGG
TCAGCACAACAAGAGCAAGCACTTAGAGATATATCTCAATACTTGCAGCAGGAATTAAATAATCTTTCTCCAACTGAGCT
AGAAGCTTTCCAAAGATGGGAGCAGGAGATTGATAATGAACTCAAACAACTAGACCAAGCCATTAAACAACAACAAATTT
CCAACAATGAAGCTCAAAGTAACCTCAGCATAACTTCCAGGGGTGTTAGTAGCACCTATCCTGCCCGCCTTCCTAACCCA
GTTCCTGATGTTCAACCTCTACAACTTAATCCTGTAGGGTCTGCCCGCAATCTATTTTTGTTTCAATTATTAAGTTATAC
AATTGCAATTTTCCTCCTGGCGGGTGCAGGCTTTAGACAACTTTATGTCACTCAACCCACCTTTGGAGCAAATCTTTGGA
CAGATTATTTTGCTCTGCTAGCTTGGGGTTTTGGAGCTGAGGCTACTCGCGATGCCGTTACCAAAACTATCCGCGAGTGG
AAATTGCCCGGACTCAAATGA

Upstream 100 bases:

>100_bases
CCCTACCATGATTTACCGTGCAGGAAAACTGGGGTATCATAACAGATAATAATTATACTTTAACAAAATGTTAGGTAATC
AAAGAATCAGGAGAACTAGT

Downstream 100 bases:

>100_bases
AACAAAGCCAAGTTAGGTTTTAGGTTTTAGGTTTTAGGTTTAAAAATTAACAAACAGAAAACAAATATCAATGTACTTAT
GGGAGCGATCGCTAATTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 486; Mature: 486

Protein sequence:

>486_residues
MMRGQKTMMVLLSLALNLVLVAPPVKAEPKVTITPSNLTVVGTKCPVFFYCPVLKRRLVLQTNQAIANLQILSLDLDRTD
GTTVLQGSAINPILSTTSVEPNQPLTIPVEFNLNDAKSGEFSGVLLAIHSDGQLVIPIIVRVKDHWLGPIFLLLLGVMVS
IGMSAYRTDGRNRDEIVVLVSRIRTQMKADPELVKSFQVKINGYLIDVDTDLTNKRWDEAKQAVAKAQTTWDKWRKSRED
WLALSEFESSFLDLDNLTTDAPYVQTVGSYLENIKRQTADKENPEQLRKELNDLRQQLVRYLGGEAKLERFDNLRNELTG
SAQQEQALRDISQYLQQELNNLSPTELEAFQRWEQEIDNELKQLDQAIKQQQISNNEAQSNLSITSRGVSSTYPARLPNP
VPDVQPLQLNPVGSARNLFLFQLLSYTIAIFLLAGAGFRQLYVTQPTFGANLWTDYFALLAWGFGAEATRDAVTKTIREW
KLPGLK

Sequences:

>Translated_486_residues
MMRGQKTMMVLLSLALNLVLVAPPVKAEPKVTITPSNLTVVGTKCPVFFYCPVLKRRLVLQTNQAIANLQILSLDLDRTD
GTTVLQGSAINPILSTTSVEPNQPLTIPVEFNLNDAKSGEFSGVLLAIHSDGQLVIPIIVRVKDHWLGPIFLLLLGVMVS
IGMSAYRTDGRNRDEIVVLVSRIRTQMKADPELVKSFQVKINGYLIDVDTDLTNKRWDEAKQAVAKAQTTWDKWRKSRED
WLALSEFESSFLDLDNLTTDAPYVQTVGSYLENIKRQTADKENPEQLRKELNDLRQQLVRYLGGEAKLERFDNLRNELTG
SAQQEQALRDISQYLQQELNNLSPTELEAFQRWEQEIDNELKQLDQAIKQQQISNNEAQSNLSITSRGVSSTYPARLPNP
VPDVQPLQLNPVGSARNLFLFQLLSYTIAIFLLAGAGFRQLYVTQPTFGANLWTDYFALLAWGFGAEATRDAVTKTIREW
KLPGLK
>Mature_486_residues
MMRGQKTMMVLLSLALNLVLVAPPVKAEPKVTITPSNLTVVGTKCPVFFYCPVLKRRLVLQTNQAIANLQILSLDLDRTD
GTTVLQGSAINPILSTTSVEPNQPLTIPVEFNLNDAKSGEFSGVLLAIHSDGQLVIPIIVRVKDHWLGPIFLLLLGVMVS
IGMSAYRTDGRNRDEIVVLVSRIRTQMKADPELVKSFQVKINGYLIDVDTDLTNKRWDEAKQAVAKAQTTWDKWRKSRED
WLALSEFESSFLDLDNLTTDAPYVQTVGSYLENIKRQTADKENPEQLRKELNDLRQQLVRYLGGEAKLERFDNLRNELTG
SAQQEQALRDISQYLQQELNNLSPTELEAFQRWEQEIDNELKQLDQAIKQQQISNNEAQSNLSITSRGVSSTYPARLPNP
VPDVQPLQLNPVGSARNLFLFQLLSYTIAIFLLAGAGFRQLYVTQPTFGANLWTDYFALLAWGFGAEATRDAVTKTIREW
KLPGLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54701; Mature: 54701

Theoretical pI: Translated: 5.64; Mature: 5.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRGQKTMMVLLSLALNLVLVAPPVKAEPKVTITPSNLTVVGTKCPVFFYCPVLKRRLVL
CCCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCEEEEECCCCCEEECHHHHHHHHH
QTNQAIANLQILSLDLDRTDGTTVLQGSAINPILSTTSVEPNQPLTIPVEFNLNDAKSGE
HCCHHHHEEEEEEEECCCCCCCEEEECCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCC
FSGVLLAIHSDGQLVIPIIVRVKDHWLGPIFLLLLGVMVSIGMSAYRTDGRNRDEIVVLV
CCEEEEEEECCCCEEEEEEEEEHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHH
SRIRTQMKADPELVKSFQVKINGYLIDVDTDLTNKRWDEAKQAVAKAQTTWDKWRKSRED
HHHHHHHCCCHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHH
WLALSEFESSFLDLDNLTTDAPYVQTVGSYLENIKRQTADKENPEQLRKELNDLRQQLVR
HHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
YLGGEAKLERFDNLRNELTGSAQQEQALRDISQYLQQELNNLSPTELEAFQRWEQEIDNE
HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LKQLDQAIKQQQISNNEAQSNLSITSRGVSSTYPARLPNPVPDVQPLQLNPVGSARNLFL
HHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHH
FQLLSYTIAIFLLAGAGFRQLYVTQPTFGANLWTDYFALLAWGFGAEATRDAVTKTIREW
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KLPGLK
CCCCCC
>Mature Secondary Structure
MMRGQKTMMVLLSLALNLVLVAPPVKAEPKVTITPSNLTVVGTKCPVFFYCPVLKRRLVL
CCCCHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCEEEEECCCCCEEECHHHHHHHHH
QTNQAIANLQILSLDLDRTDGTTVLQGSAINPILSTTSVEPNQPLTIPVEFNLNDAKSGE
HCCHHHHEEEEEEEECCCCCCCEEEECCCCCCHHCCCCCCCCCCEEEEEEECCCCCCCCC
FSGVLLAIHSDGQLVIPIIVRVKDHWLGPIFLLLLGVMVSIGMSAYRTDGRNRDEIVVLV
CCEEEEEEECCCCEEEEEEEEEHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHH
SRIRTQMKADPELVKSFQVKINGYLIDVDTDLTNKRWDEAKQAVAKAQTTWDKWRKSRED
HHHHHHHCCCHHHHHHHEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHH
WLALSEFESSFLDLDNLTTDAPYVQTVGSYLENIKRQTADKENPEQLRKELNDLRQQLVR
HHHHHHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
YLGGEAKLERFDNLRNELTGSAQQEQALRDISQYLQQELNNLSPTELEAFQRWEQEIDNE
HHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LKQLDQAIKQQQISNNEAQSNLSITSRGVSSTYPARLPNPVPDVQPLQLNPVGSARNLFL
HHHHHHHHHHHHHCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHH
FQLLSYTIAIFLLAGAGFRQLYVTQPTFGANLWTDYFALLAWGFGAEATRDAVTKTIREW
HHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
KLPGLK
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA