| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113476356
Identifier: 113476356
GI number: 113476356
Start: 4275187
End: 4275582
Strand: Reverse
Name: 113476356
Synonym: Tery_2761
Alternate gene names: NA
Gene position: 4275582-4275187 (Counterclockwise)
Preceding gene: 113476357
Following gene: 113476355
Centisome position: 55.17
GC content: 35.35
Gene sequence:
>396_bases ATGTCATTATCTAAATACGAAGAAAATATAATAAAGTTTGTCGACCTAATAAAAAAACAACCTAATTTATTCAAAGAAAA AGAACGCACTAATTTGCGGCAGTTGCTTCAAAAGCTTCCAGATAATGTTGAAAAAATCTCTGATGCCATAGCCCTCTGGT GTAATGAACATCCGCAAATTCGAGATGCTTTTCTTAATATCCGCATTAATAGCATTCCAGATCCTCGAGCTGCAAATGGT CGTGCTACTCCTCTCACAGGAAAGGAAACCAAGGAGATAATCGAAAACTTGGTTATTGAGAGCAGCGAGTCAAAAGAATC AGAACTATCAAAAAAAGGGAAAACCCTGATCAGTAGAGGCATTGATATTATTGGTAGTTTTTTTTCAACAAAATAA
Upstream 100 bases:
>100_bases ATAAATCTGAAATATGCTGTAAAATGTCAGAGAACGCTCGGCCCTTTGAATCGCCCTTTTACTGAGTTGTATTTTGTACT ATTAGTCAATAGGAGGAAAA
Downstream 100 bases:
>100_bases TATAGCAAATAGGCCGTCAGCAACTCATAGTAGTTGTAGGTTGGGTTGAAGCCACAAAACCCAACATAGATTAATTCGGC TTGTAGTTCGACTTTAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MSLSKYEENIIKFVDLIKKQPNLFKEKERTNLRQLLQKLPDNVEKISDAIALWCNEHPQIRDAFLNIRINSIPDPRAANG RATPLTGKETKEIIENLVIESSESKESELSKKGKTLISRGIDIIGSFFSTK
Sequences:
>Translated_131_residues MSLSKYEENIIKFVDLIKKQPNLFKEKERTNLRQLLQKLPDNVEKISDAIALWCNEHPQIRDAFLNIRINSIPDPRAANG RATPLTGKETKEIIENLVIESSESKESELSKKGKTLISRGIDIIGSFFSTK >Mature_130_residues SLSKYEENIIKFVDLIKKQPNLFKEKERTNLRQLLQKLPDNVEKISDAIALWCNEHPQIRDAFLNIRINSIPDPRAANGR ATPLTGKETKEIIENLVIESSESKESELSKKGKTLISRGIDIIGSFFSTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14924; Mature: 14793
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSKYEENIIKFVDLIKKQPNLFKEKERTNLRQLLQKLPDNVEKISDAIALWCNEHPQI CCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH RDAFLNIRINSIPDPRAANGRATPLTGKETKEIIENLVIESSESKESELSKKGKTLISRG HHHHHHCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH IDIIGSFFSTK HHHHHHHHCCC >Mature Secondary Structure SLSKYEENIIKFVDLIKKQPNLFKEKERTNLRQLLQKLPDNVEKISDAIALWCNEHPQI CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHH RDAFLNIRINSIPDPRAANGRATPLTGKETKEIIENLVIESSESKESELSKKGKTLISRG HHHHHHCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH IDIIGSFFSTK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA