| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is yqjG [H]
Identifier: 113476246
GI number: 113476246
Start: 4091507
End: 4092475
Strand: Reverse
Name: yqjG [H]
Synonym: Tery_2639
Alternate gene names: 113476246
Gene position: 4092475-4091507 (Counterclockwise)
Preceding gene: 113476251
Following gene: 113476245
Centisome position: 52.81
GC content: 35.29
Gene sequence:
>969_bases ATGGTTAATAAACGCAGATCACTTCCACCCTCTCTAACAATTAAATTAGGAAAATGGGTTTGGACAACCCTCTGGCAAAC AATGATGTCAAAACTTGCTCCAAGAAACAATTCAGGAGAATACATTCGCCCAGTCAGCCTATTTAGACAAACAGTAGGGA TACAACCAGAGAATAAATATCAACCAGCTACCAAACGCTACCGCCTATTTGTTGGGCTAGGTTGCCCTTGGGCACACCGA ACTATTGTAGTTAGAGCACTGAAAGGTTTGGAAGATGCTATATCAGTAACTATTGCTTCTCCAGCAGGAGATAAAGGCAT TTGGGTATTTGAAGAAGAAGAAGAAGGATGCAATACTTTACCAGAATTATATAATTTAGCACAGCCTGGTTACAACGGCC GTGCCACTGTACCTGTGTTGTGGGATGAGCAAACAAAAACTATTGTTAATAATGAAAGTGCAGATATTATTGTTATACTC AATACTGAATTTAATCACTTTGCCAAAAATTCTAATCTTGACCTTTATCCAGAACAACTAAAAGCAAAAATAGACCAGTG GAATGAAAAGATTTATCATACAGTAAATAATGGAGTTTATCGTTGTGGGTTTGCCCAAAGTCAAGAAGCTTATGAAAAAG CTTGCCAAGAATTATTTACTACCTTAGATGAAATTGACAATATGCTTTCTACAAGTCGATATCTTTGTGGTGAGTCAGTA ACATTAGCAGATGTACGTTTATTTACTACTTTATTCCGCTTTGATATTGTTTACTATGGATTATTTAAATGTAACTTACG GAGAATTAAAGATTATAAATATTTGAGTGTTTATTTACAAGATTTATATAAACTTCCAGGAATAGCAGAGACTTGCAATT TAGAGGCAGTGAAAAAAGATTATTATGGTAATCTTTTTCCTCTTAACCCAGGAGGTATAATTCCTTTAGGTCCAGATCTA AATAGCTAG
Upstream 100 bases:
>100_bases GTCAGGCGATCGCATCAAAAATCAACTAAATTCCTTTGAACCATATTATAGTATCTTTGCCTAAGCCCTGTTAATATTAA AACAACGTATTATCAAACAA
Downstream 100 bases:
>100_bases GTTTTACTGAAAAAAACAAAGGGGAAAGTTGGCTATCAGAGAGAAAAATTAGGATAACACATCTTGTTGGCTAATAGGCA CAAAATTTTTGAGCTTTAAC
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKYQPATKRYRLFVGLGCPWAHR TIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTLPELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVIL NTEFNHFAKNSNLDLYPEQLKAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKDYYGNLFPLNPGGIIPLGPDL NS
Sequences:
>Translated_322_residues MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKYQPATKRYRLFVGLGCPWAHR TIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTLPELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVIL NTEFNHFAKNSNLDLYPEQLKAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKDYYGNLFPLNPGGIIPLGPDL NS >Mature_322_residues MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKYQPATKRYRLFVGLGCPWAHR TIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTLPELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVIL NTEFNHFAKNSNLDLYPEQLKAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKDYYGNLFPLNPGGIIPLGPDL NS
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=313, Percent_Identity=42.4920127795527, Blast_Score=249, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6322929, Length=364, Percent_Identity=34.0659340659341, Blast_Score=199, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6323906, Length=360, Percent_Identity=35.2777777777778, Blast_Score=194, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6321593, Length=334, Percent_Identity=30.8383233532934, Blast_Score=139, Evalue=7e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 36824; Mature: 36824
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKY CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCC QPATKRYRLFVGLGCPWAHRTIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTL CCCCCEEEEEEECCCCHHHHHHHHHHHHCHHHHEEEEEECCCCCCCEEEEECCCCCCCHH PELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVILNTEFNHFAKNSNLDLYPEQL HHHHHHCCCCCCCCEEEEEEECCCCHHEECCCCCCEEEEEECCCHHHHCCCCCCCCHHHH KAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH YYGNLFPLNPGGIIPLGPDLNS HCCCEEEECCCCEEECCCCCCC >Mature Secondary Structure MVNKRRSLPPSLTIKLGKWVWTTLWQTMMSKLAPRNNSGEYIRPVSLFRQTVGIQPENKY CCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHHHHHHCCCCCCCC QPATKRYRLFVGLGCPWAHRTIVVRALKGLEDAISVTIASPAGDKGIWVFEEEEEGCNTL CCCCCEEEEEEECCCCHHHHHHHHHHHHCHHHHEEEEEECCCCCCCEEEEECCCCCCCHH PELYNLAQPGYNGRATVPVLWDEQTKTIVNNESADIIVILNTEFNHFAKNSNLDLYPEQL HHHHHHCCCCCCCCEEEEEEECCCCHHEECCCCCCEEEEEECCCHHHHCCCCCCCCHHHH KAKIDQWNEKIYHTVNNGVYRCGFAQSQEAYEKACQELFTTLDEIDNMLSTSRYLCGESV HHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC TLADVRLFTTLFRFDIVYYGLFKCNLRRIKDYKYLSVYLQDLYKLPGIAETCNLEAVKKD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCHHHHHHH YYGNLFPLNPGGIIPLGPDLNS HCCCEEEECCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]