Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113476251

Identifier: 113476251

GI number: 113476251

Start: 4097167

End: 4098015

Strand: Reverse

Name: 113476251

Synonym: Tery_2644

Alternate gene names: NA

Gene position: 4098015-4097167 (Counterclockwise)

Preceding gene: 113476252

Following gene: 113476246

Centisome position: 52.88

GC content: 32.74

Gene sequence:

>849_bases
ATGAAAACACAATGGGAAAATTTTCTGCAAAATCTTGGTGAATGGCACGGTTCATTTACTAAAATTTCTGACAAATTAGC
AATACTGCAAGACAGACCTAGTATTCTGATTTTAGAAGGTCTTGATGACCAGAATAAACGAGTACGTTTAACACTACGTC
GCTTTAACTCTTTTGTAAAAAATCCTGAGTCAAAAGCTGATGAAATAGTGATAGAATATAATACTACAGATCAAAATATT
TTATATTTTGAAAATGGTGCTTTTTCTAGAGGAATAATGAAAATAACACCCTTTTCAAGATGTGTTACTGAGTTTTGTTT
GATTAATAAAAATCGTCGTCTACGTTTAGTTGAATTCTTTAACCAAGATGGTAATTTTGATAAATTAATTTTAATTCGAG
AAAAACGAGCTGGAACAGATGCTTTAGAAAACCCTCCTTTGACAGTAGATGATTTATTAGGAAAATGGCAGGGAGAAGCT
ATTACGATGTATCCTGATTTGCGGGAACCTAATACTTATACAACTCAAATGGAATTAAATATTGATAATACAGGTAGATT
AGTTCAGGAAATTACTTTTGGTGATCAGAATCCGACAATTATTACTTCTAGCGCTATAATTGAAGGGTCAATTTTACATT
TTGACCAAAGTTCTCAACCTGTCAAAGTTTTGTTGCTTCCTGATGGTGCATCTGCTACTTTACCTGTCAAAGTTGAGTTG
AGAAAACCTTTATTTTTTGAACTTGGCTGGTTAGTTGAGCCGCAACTTCGTCAACGAATTATTCGTAGTTATAATGACAA
AGGAGAATGGGTAAGTTCAACTTTTGTTACGGAGCAAAAAATTCAATAA

Upstream 100 bases:

>100_bases
TACTATTAATAAATTCCAAAAGCTAATCTCATGTAGAGACTTGGGATTTTGTTTAATCTCTTTTAAAATAATAAAAAACT
ACAAATATTTCCTAAAAAAT

Downstream 100 bases:

>100_bases
AAAAAAGTTTTGCGATGTTACCTAACTTGCAAGGTGTCTGAAACTGCAGTTTTTTCCTTCTAATATGATCATCTCTGTTT
TTCTGGGTGATCACTATTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MKTQWENFLQNLGEWHGSFTKISDKLAILQDRPSILILEGLDDQNKRVRLTLRRFNSFVKNPESKADEIVIEYNTTDQNI
LYFENGAFSRGIMKITPFSRCVTEFCLINKNRRLRLVEFFNQDGNFDKLILIREKRAGTDALENPPLTVDDLLGKWQGEA
ITMYPDLREPNTYTTQMELNIDNTGRLVQEITFGDQNPTIITSSAIIEGSILHFDQSSQPVKVLLLPDGASATLPVKVEL
RKPLFFELGWLVEPQLRQRIIRSYNDKGEWVSSTFVTEQKIQ

Sequences:

>Translated_282_residues
MKTQWENFLQNLGEWHGSFTKISDKLAILQDRPSILILEGLDDQNKRVRLTLRRFNSFVKNPESKADEIVIEYNTTDQNI
LYFENGAFSRGIMKITPFSRCVTEFCLINKNRRLRLVEFFNQDGNFDKLILIREKRAGTDALENPPLTVDDLLGKWQGEA
ITMYPDLREPNTYTTQMELNIDNTGRLVQEITFGDQNPTIITSSAIIEGSILHFDQSSQPVKVLLLPDGASATLPVKVEL
RKPLFFELGWLVEPQLRQRIIRSYNDKGEWVSSTFVTEQKIQ
>Mature_282_residues
MKTQWENFLQNLGEWHGSFTKISDKLAILQDRPSILILEGLDDQNKRVRLTLRRFNSFVKNPESKADEIVIEYNTTDQNI
LYFENGAFSRGIMKITPFSRCVTEFCLINKNRRLRLVEFFNQDGNFDKLILIREKRAGTDALENPPLTVDDLLGKWQGEA
ITMYPDLREPNTYTTQMELNIDNTGRLVQEITFGDQNPTIITSSAIIEGSILHFDQSSQPVKVLLLPDGASATLPVKVEL
RKPLFFELGWLVEPQLRQRIIRSYNDKGEWVSSTFVTEQKIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32545; Mature: 32545

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTQWENFLQNLGEWHGSFTKISDKLAILQDRPSILILEGLDDQNKRVRLTLRRFNSFVK
CCCHHHHHHHHHHHHCCCHHHHHCEEEEEECCCCEEEEECCCCCCCEEEEEHHHHHHHHC
NPESKADEIVIEYNTTDQNILYFENGAFSRGIMKITPFSRCVTEFCLINKNRRLRLVEFF
CCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEE
NQDGNFDKLILIREKRAGTDALENPPLTVDDLLGKWQGEAITMYPDLREPNTYTTQMELN
CCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEE
IDNTGRLVQEITFGDQNPTIITSSAIIEGSILHFDQSSQPVKVLLLPDGASATLPVKVEL
ECCCCCEEEEEECCCCCCEEEEECEEEECEEEEECCCCCCEEEEEEECCCCCEEEEEEEE
RKPLFFELGWLVEPQLRQRIIRSYNDKGEWVSSTFVTEQKIQ
CCCEEEEECCEECHHHHHHHHHHCCCCCCEEEHEECCHHCCC
>Mature Secondary Structure
MKTQWENFLQNLGEWHGSFTKISDKLAILQDRPSILILEGLDDQNKRVRLTLRRFNSFVK
CCCHHHHHHHHHHHHCCCHHHHHCEEEEEECCCCEEEEECCCCCCCEEEEEHHHHHHHHC
NPESKADEIVIEYNTTDQNILYFENGAFSRGIMKITPFSRCVTEFCLINKNRRLRLVEFF
CCCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCHHHHHHHHHHCCCCCCEEEEEEE
NQDGNFDKLILIREKRAGTDALENPPLTVDDLLGKWQGEAITMYPDLREPNTYTTQMELN
CCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCCCEEEEEEEE
IDNTGRLVQEITFGDQNPTIITSSAIIEGSILHFDQSSQPVKVLLLPDGASATLPVKVEL
ECCCCCEEEEEECCCCCCEEEEECEEEECEEEEECCCCCCEEEEEEECCCCCEEEEEEEE
RKPLFFELGWLVEPQLRQRIIRSYNDKGEWVSSTFVTEQKIQ
CCCEEEEECCEECHHHHHHHHHHCCCCCCEEEHEECCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA