The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yegL [H]

Identifier: 113476000

GI number: 113476000

Start: 3657638

End: 3658300

Strand: Reverse

Name: yegL [H]

Synonym: Tery_2368

Alternate gene names: 113476000

Gene position: 3658300-3657638 (Counterclockwise)

Preceding gene: 113476001

Following gene: 113475999

Centisome position: 47.2

GC content: 39.22

Gene sequence:

>663_bases
ATGAGACTTGATGAATTAGTAGAATTTGCAGAAAATCCCGAACCTCGTTGCCCTTGTGTGTTACTATTAGATACTTCGGC
ATCAATGACGGGCACACCTATTAAAGCTTTAAATGATGGGTTGGAAACTTTTAGAGATAATTTAATTACTGATGACTTGG
CTAAAAAACGGGTAGAGGTTGCTATTATTTCTTTTGATAATCAGGTGAAAATTGTCCAAGACTTTATTACCGCTGACCAA
TTTGAAAATCCAATATTAACGGCCCAAGGACAAACTTATATGGGTACTGCCATTCATAAAGCTCTAGATATGATTGCTGC
CCGGAAGTCAGAATATCGGAATAATGGTATAACTTATTATCGACCTTGGGTATTTTTGATTACTGATGGTGAACCTCAAG
GAGAATCAGAAAAAGTTTTCAAAGAAGCTGGCGATCGCATTAAACAGGAGGAGGATAACAAGCATGTTGCCTTCTTTGCA
GTGGGTGTGGAAGGAGCAAATATGGATAAGTTGGGGGAAATAGTTCAGAGAACGCCCCTAAAACTGAGAGGACTTAATTT
TCGAGAAATGTTTATTTGGCTATCTGCTAGTATGCAGCAAGTTTCTCATTCTAAAGTTGACGAACAAGTCGCCCTACCTC
CTCCTGGATGGGGAGCAGTTTAA

Upstream 100 bases:

>100_bases
CACTAATAAAAAAAGATAATATTCGTTTAATATTGTAGAACTAAAGTCTCAGAATCAGAGACAAAAATCAGAAAATAACA
TAACCCAAAACAAAATTAAT

Downstream 100 bases:

>100_bases
TTATGAAAGGAAGAAGAAAAAGTTATATAAACAGAACTTATATAGAAACTGGGATCTGGAGCTAAAATTTGGAATGTCAA
GCATTATTGGACTGATACAC

Product: von Willebrand factor, type A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEVAIISFDNQVKIVQDFITADQ
FENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYYRPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFA
VGVEGANMDKLGEIVQRTPLKLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV

Sequences:

>Translated_220_residues
MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEVAIISFDNQVKIVQDFITADQ
FENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYYRPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFA
VGVEGANMDKLGEIVQRTPLKLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV
>Mature_220_residues
MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEVAIISFDNQVKIVQDFITADQ
FENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYYRPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFA
VGVEGANMDKLGEIVQRTPLKLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV

Specific function: Unknown

COG id: COG4245

COG function: function code R; Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 VWFA domain [H]

Homologues:

Organism=Escherichia coli, GI1788388, Length=214, Percent_Identity=54.2056074766355, Blast_Score=213, Evalue=9e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011392
- InterPro:   IPR002035 [H]

Pfam domain/function: PF00092 VWA [H]

EC number: NA

Molecular weight: Translated: 24720; Mature: 24720

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEV
CCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEE
AIISFDNQVKIVQDFITADQFENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYY
EEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
RPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFAVGVEGANMDKLGEIVQRTPL
ECEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCC
KLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV
EECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
>Mature Secondary Structure
MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEV
CCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEE
AIISFDNQVKIVQDFITADQFENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYY
EEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
RPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFAVGVEGANMDKLGEIVQRTPL
ECEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCC
KLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV
EECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]