Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is yegL [H]
Identifier: 113476000
GI number: 113476000
Start: 3657638
End: 3658300
Strand: Reverse
Name: yegL [H]
Synonym: Tery_2368
Alternate gene names: 113476000
Gene position: 3658300-3657638 (Counterclockwise)
Preceding gene: 113476001
Following gene: 113475999
Centisome position: 47.2
GC content: 39.22
Gene sequence:
>663_bases ATGAGACTTGATGAATTAGTAGAATTTGCAGAAAATCCCGAACCTCGTTGCCCTTGTGTGTTACTATTAGATACTTCGGC ATCAATGACGGGCACACCTATTAAAGCTTTAAATGATGGGTTGGAAACTTTTAGAGATAATTTAATTACTGATGACTTGG CTAAAAAACGGGTAGAGGTTGCTATTATTTCTTTTGATAATCAGGTGAAAATTGTCCAAGACTTTATTACCGCTGACCAA TTTGAAAATCCAATATTAACGGCCCAAGGACAAACTTATATGGGTACTGCCATTCATAAAGCTCTAGATATGATTGCTGC CCGGAAGTCAGAATATCGGAATAATGGTATAACTTATTATCGACCTTGGGTATTTTTGATTACTGATGGTGAACCTCAAG GAGAATCAGAAAAAGTTTTCAAAGAAGCTGGCGATCGCATTAAACAGGAGGAGGATAACAAGCATGTTGCCTTCTTTGCA GTGGGTGTGGAAGGAGCAAATATGGATAAGTTGGGGGAAATAGTTCAGAGAACGCCCCTAAAACTGAGAGGACTTAATTT TCGAGAAATGTTTATTTGGCTATCTGCTAGTATGCAGCAAGTTTCTCATTCTAAAGTTGACGAACAAGTCGCCCTACCTC CTCCTGGATGGGGAGCAGTTTAA
Upstream 100 bases:
>100_bases CACTAATAAAAAAAGATAATATTCGTTTAATATTGTAGAACTAAAGTCTCAGAATCAGAGACAAAAATCAGAAAATAACA TAACCCAAAACAAAATTAAT
Downstream 100 bases:
>100_bases TTATGAAAGGAAGAAGAAAAAGTTATATAAACAGAACTTATATAGAAACTGGGATCTGGAGCTAAAATTTGGAATGTCAA GCATTATTGGACTGATACAC
Product: von Willebrand factor, type A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEVAIISFDNQVKIVQDFITADQ FENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYYRPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFA VGVEGANMDKLGEIVQRTPLKLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV
Sequences:
>Translated_220_residues MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEVAIISFDNQVKIVQDFITADQ FENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYYRPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFA VGVEGANMDKLGEIVQRTPLKLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV >Mature_220_residues MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEVAIISFDNQVKIVQDFITADQ FENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYYRPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFA VGVEGANMDKLGEIVQRTPLKLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV
Specific function: Unknown
COG id: COG4245
COG function: function code R; Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 VWFA domain [H]
Homologues:
Organism=Escherichia coli, GI1788388, Length=214, Percent_Identity=54.2056074766355, Blast_Score=213, Evalue=9e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011392 - InterPro: IPR002035 [H]
Pfam domain/function: PF00092 VWA [H]
EC number: NA
Molecular weight: Translated: 24720; Mature: 24720
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS50234 VWFA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEV CCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEE AIISFDNQVKIVQDFITADQFENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYY EEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE RPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFAVGVEGANMDKLGEIVQRTPL ECEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCC KLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV EECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC >Mature Secondary Structure MRLDELVEFAENPEPRCPCVLLLDTSASMTGTPIKALNDGLETFRDNLITDDLAKKRVEV CCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEE AIISFDNQVKIVQDFITADQFENPILTAQGQTYMGTAIHKALDMIAARKSEYRNNGITYY EEEECCCCHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE RPWVFLITDGEPQGESEKVFKEAGDRIKQEEDNKHVAFFAVGVEGANMDKLGEIVQRTPL ECEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCC KLRGLNFREMFIWLSASMQQVSHSKVDEQVALPPPGWGAV EECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]