Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is yegK [H]
Identifier: 113475999
GI number: 113475999
Start: 3656450
End: 3657214
Strand: Reverse
Name: yegK [H]
Synonym: Tery_2367
Alternate gene names: 113475999
Gene position: 3657214-3656450 (Counterclockwise)
Preceding gene: 113476000
Following gene: 113475998
Centisome position: 47.19
GC content: 43.79
Gene sequence:
>765_bases ATGTCAATAGAAGCAGAAATTAAGTGGCGAGTGATATCGGTATCAGTGGCGGGTAAGAGTCACGAGAAACGGGGACAACT ATGTCAGGATGCACATCATTGGCAGATTTTGCCGGAGGGAATTTTAGTTGCTGCTGTTGCTGATGGTGCAGGTTCGTCTA ACTTGGGAGATGTTGGTGCTAAAATAGCTGTTGGTGTTGCAGTAGAGGCTATTTCCCAACAAAAGTTGTTGCCAGTAGAT GATGTTGGTTGGCAATTTTTGTTAGTTGATACTTTGAAGGCGGCGAAAAATGCTGTTTTGGCTGAGTCTCGGGTTAGAGA GGTTGAGGGGCGGGAGTTGGCTGCAACTTTGATTTTGGTGGTGGCAACACCAGAGTTTGCTATTGCTGCTCAAGTGGGAG ATGGTGCAGCAGTTGTAGGGGATGGAGAGGAGAATATTTTTCCAGTGACATCACCTCAGACTGGAGAACATGTTAATGAG ACAACTTTTTTGATTTCAGAGCAAGGTGTAGAAAATGCTCAGGTGAATATATGGCGAGGAAAACTTGTTCATTTAGCAAT TTTTTCGGATGGGTTGCAAATGTTAGCTTTGAAAATGCCAATGGGGTTGCCTCATAGTCCGTTTTTTGCTCCTTTGTTTA AGTTTATGACGGTGGTTACTAATGAAGAAGAGGCAAATAAGCAGTTGGAGGATTTTTTGCGCTCGCCAAAGGTAACGGGG AGGACTGATGATGATTTGACTTTATTGTTGGCACGGTATGGTTAA
Upstream 100 bases:
>100_bases TTTGTAAGTGTTTTCCCCAGCAATGACAGAGTTACTTTATGGGTGTGTAAGTCTTAAATTAGTGCATTGAAGAAAAAAAA AGTTTGGTAAATATTAGGTT
Downstream 100 bases:
>100_bases AGTTATTATATTTTAGCTCCTATTGAGTTTGGGCTCCCGGGGCTAGGTTGTCTGAAATTTTATTAGCTCCTATTGAGTTT GAGCTCCCGGAGCTAAGTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 254; Mature: 253
Protein sequence:
>254_residues MSIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGAKIAVGVAVEAISQQKLLPVD DVGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILVVATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNE TTFLISEQGVENAQVNIWRGKLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTG RTDDDLTLLLARYG
Sequences:
>Translated_254_residues MSIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGAKIAVGVAVEAISQQKLLPVD DVGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILVVATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNE TTFLISEQGVENAQVNIWRGKLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTG RTDDDLTLLLARYG >Mature_253_residues SIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGAKIAVGVAVEAISQQKLLPVDD VGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILVVATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNET TFLISEQGVENAQVNIWRGKLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTGR TDDDLTLLLARYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788387, Length=256, Percent_Identity=35.15625, Blast_Score=135, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001932 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27331; Mature: 27199
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGA CCCCEEEEEEEEEEEECCCCCHHHHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCHHCH KIAVGVAVEAISQQKLLPVDDVGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILV HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE VATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNETTFLISEQGVENAQVNIWRG EECCCEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEC KLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTG EEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC RTDDDLTLLLARYG CCCCCEEEEEEECC >Mature Secondary Structure SIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGA CCCEEEEEEEEEEEECCCCCHHHHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCHHCH KIAVGVAVEAISQQKLLPVDDVGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILV HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE VATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNETTFLISEQGVENAQVNIWRG EECCCEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEC KLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTG EEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC RTDDDLTLLLARYG CCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]