Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is yegK [H]

Identifier: 113475999

GI number: 113475999

Start: 3656450

End: 3657214

Strand: Reverse

Name: yegK [H]

Synonym: Tery_2367

Alternate gene names: 113475999

Gene position: 3657214-3656450 (Counterclockwise)

Preceding gene: 113476000

Following gene: 113475998

Centisome position: 47.19

GC content: 43.79

Gene sequence:

>765_bases
ATGTCAATAGAAGCAGAAATTAAGTGGCGAGTGATATCGGTATCAGTGGCGGGTAAGAGTCACGAGAAACGGGGACAACT
ATGTCAGGATGCACATCATTGGCAGATTTTGCCGGAGGGAATTTTAGTTGCTGCTGTTGCTGATGGTGCAGGTTCGTCTA
ACTTGGGAGATGTTGGTGCTAAAATAGCTGTTGGTGTTGCAGTAGAGGCTATTTCCCAACAAAAGTTGTTGCCAGTAGAT
GATGTTGGTTGGCAATTTTTGTTAGTTGATACTTTGAAGGCGGCGAAAAATGCTGTTTTGGCTGAGTCTCGGGTTAGAGA
GGTTGAGGGGCGGGAGTTGGCTGCAACTTTGATTTTGGTGGTGGCAACACCAGAGTTTGCTATTGCTGCTCAAGTGGGAG
ATGGTGCAGCAGTTGTAGGGGATGGAGAGGAGAATATTTTTCCAGTGACATCACCTCAGACTGGAGAACATGTTAATGAG
ACAACTTTTTTGATTTCAGAGCAAGGTGTAGAAAATGCTCAGGTGAATATATGGCGAGGAAAACTTGTTCATTTAGCAAT
TTTTTCGGATGGGTTGCAAATGTTAGCTTTGAAAATGCCAATGGGGTTGCCTCATAGTCCGTTTTTTGCTCCTTTGTTTA
AGTTTATGACGGTGGTTACTAATGAAGAAGAGGCAAATAAGCAGTTGGAGGATTTTTTGCGCTCGCCAAAGGTAACGGGG
AGGACTGATGATGATTTGACTTTATTGTTGGCACGGTATGGTTAA

Upstream 100 bases:

>100_bases
TTTGTAAGTGTTTTCCCCAGCAATGACAGAGTTACTTTATGGGTGTGTAAGTCTTAAATTAGTGCATTGAAGAAAAAAAA
AGTTTGGTAAATATTAGGTT

Downstream 100 bases:

>100_bases
AGTTATTATATTTTAGCTCCTATTGAGTTTGGGCTCCCGGGGCTAGGTTGTCTGAAATTTTATTAGCTCCTATTGAGTTT
GAGCTCCCGGAGCTAAGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MSIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGAKIAVGVAVEAISQQKLLPVD
DVGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILVVATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNE
TTFLISEQGVENAQVNIWRGKLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTG
RTDDDLTLLLARYG

Sequences:

>Translated_254_residues
MSIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGAKIAVGVAVEAISQQKLLPVD
DVGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILVVATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNE
TTFLISEQGVENAQVNIWRGKLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTG
RTDDDLTLLLARYG
>Mature_253_residues
SIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGAKIAVGVAVEAISQQKLLPVDD
VGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILVVATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNET
TFLISEQGVENAQVNIWRGKLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTGR
TDDDLTLLLARYG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788387, Length=256, Percent_Identity=35.15625, Blast_Score=135, Evalue=3e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001932 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27331; Mature: 27199

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGA
CCCCEEEEEEEEEEEECCCCCHHHHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCHHCH
KIAVGVAVEAISQQKLLPVDDVGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILV
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
VATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNETTFLISEQGVENAQVNIWRG
EECCCEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEC
KLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTG
EEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
RTDDDLTLLLARYG
CCCCCEEEEEEECC
>Mature Secondary Structure 
SIEAEIKWRVISVSVAGKSHEKRGQLCQDAHHWQILPEGILVAAVADGAGSSNLGDVGA
CCCEEEEEEEEEEEECCCCCHHHHHHHCCCCCEEECCCCEEEEEEECCCCCCCCCHHCH
KIAVGVAVEAISQQKLLPVDDVGWQFLLVDTLKAAKNAVLAESRVREVEGRELAATLILV
HHHHHHHHHHHCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEE
VATPEFAIAAQVGDGAAVVGDGEENIFPVTSPQTGEHVNETTFLISEQGVENAQVNIWRG
EECCCEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCEEEEEECCCCCCCEEEEEEC
KLVHLAIFSDGLQMLALKMPMGLPHSPFFAPLFKFMTVVTNEEEANKQLEDFLRSPKVTG
EEEEEEEECCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC
RTDDDLTLLLARYG
CCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]