Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113476001
Identifier: 113476001
GI number: 113476001
Start: 3659573
End: 3659785
Strand: Reverse
Name: 113476001
Synonym: Tery_2369
Alternate gene names: NA
Gene position: 3659785-3659573 (Counterclockwise)
Preceding gene: 113476002
Following gene: 113476000
Centisome position: 47.22
GC content: 35.68
Gene sequence:
>213_bases ATGGTAACAACTGGCACAACTCTATCAAATAAAGAACGTTTAGAAAAAGCTTGGCAAGCTTTTCAAGCTGTCCAAAATTT GCAAGAAGATCGACTAACTTGGGGTATTAATCATGTTAGTTTATATGTCGAAAATATTGATGGAGATTGGCTGGAAAACT GGGGTGAAGAGGATGAAGAGGAATTAACTGAAAAGTTATTGCTAAGAAAGTAG
Upstream 100 bases:
>100_bases ATACATTAAGTTTTGTTTTAGATAGGAATTGATCTATTCCTATTGAGTTTTGCTTCATTTTGGAAAATAAAACTATACAT TTTAACAGTAGGCAGGATAT
Downstream 100 bases:
>100_bases TCAGGAGTTAGAAGTCAAGACTCAGAAGTTAGGAATAAATAATAACATATTTATACATTTATACTTACAGTAGATTCTAA GTATCTCAGGTATAAGTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 70
Protein sequence:
>70_residues MVTTGTTLSNKERLEKAWQAFQAVQNLQEDRLTWGINHVSLYVENIDGDWLENWGEEDEEELTEKLLLRK
Sequences:
>Translated_70_residues MVTTGTTLSNKERLEKAWQAFQAVQNLQEDRLTWGINHVSLYVENIDGDWLENWGEEDEEELTEKLLLRK >Mature_70_residues MVTTGTTLSNKERLEKAWQAFQAVQNLQEDRLTWGINHVSLYVENIDGDWLENWGEEDEEELTEKLLLRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8263; Mature: 8263
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTTGTTLSNKERLEKAWQAFQAVQNLQEDRLTWGINHVSLYVENIDGDWLENWGEEDEE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEECCCCHHHHCCCCCCHH ELTEKLLLRK HHHHHHHCCC >Mature Secondary Structure MVTTGTTLSNKERLEKAWQAFQAVQNLQEDRLTWGINHVSLYVENIDGDWLENWGEEDEE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHEEEECCCCHHHHCCCCCCHH ELTEKLLLRK HHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA