Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113475955
Identifier: 113475955
GI number: 113475955
Start: 3594845
End: 3595114
Strand: Reverse
Name: 113475955
Synonym: Tery_2320
Alternate gene names: NA
Gene position: 3595114-3594845 (Counterclockwise)
Preceding gene: 113475969
Following gene: 113475952
Centisome position: 46.39
GC content: 44.07
Gene sequence:
>270_bases TTGGAACGCACAAATGGAATTATCAGACAGCAGCTCGGTCGATGGCATCGCCGACAGAATAAATTTGGCAAGCTCTGGCA AGAAACTGATGTAACAATAAGGTTGGCGAGGGCCTACTTTAATTGGATTTGGGTTCATAGTCGCAAAGAAAATACTGCTG CGCAAAGAGCTGAGGAACGCGATCGCTCCTTGGAGTTGGAACGACTTAATTACTTATCCCACACTTTACTGACGCACTAC CGGAAATTCTATAATGATCCTTTTTGCTAA
Upstream 100 bases:
>100_bases AACTAGCTGTAAAAAATAGCTAACTGATAATTGCGGAGGGTATGAACGAGTTTTCGCTCCAGAAGTAGAATACATTATTG GTAAAAACTATATACAGCAA
Downstream 100 bases:
>100_bases GAACAGAGTCGACGTCATTTATAATAATGGGCTTTCTTGGACTTCCTAAAACAAAAACCAGATTATTGTAACAATGAATA AGCCAGATCTTTATTACAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 89; Mature: 89
Protein sequence:
>89_residues MERTNGIIRQQLGRWHRRQNKFGKLWQETDVTIRLARAYFNWIWVHSRKENTAAQRAEERDRSLELERLNYLSHTLLTHY RKFYNDPFC
Sequences:
>Translated_89_residues MERTNGIIRQQLGRWHRRQNKFGKLWQETDVTIRLARAYFNWIWVHSRKENTAAQRAEERDRSLELERLNYLSHTLLTHY RKFYNDPFC >Mature_89_residues MERTNGIIRQQLGRWHRRQNKFGKLWQETDVTIRLARAYFNWIWVHSRKENTAAQRAEERDRSLELERLNYLSHTLLTHY RKFYNDPFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11066; Mature: 11066
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERTNGIIRQQLGRWHRRQNKFGKLWQETDVTIRLARAYFNWIWVHSRKENTAAQRAEER CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHH DRSLELERLNYLSHTLLTHYRKFYNDPFC HHCCHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MERTNGIIRQQLGRWHRRQNKFGKLWQETDVTIRLARAYFNWIWVHSRKENTAAQRAEER CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHH DRSLELERLNYLSHTLLTHYRKFYNDPFC HHCCHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA