BacMap

Definition	Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession	NC_008312
Length	7,750,108

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The map label for this gene is hflB [C]

Identifier: 113475969

GI number: 113475969

Start: 3610554

End: 3612473

Strand: Reverse

Name: hflB [C]

Synonym: Tery_2337

Alternate gene names: 113475969

Gene position: 3612473-3610554 (Counterclockwise)

Preceding gene: 113475970

Following gene: 113475955

Centisome position: 46.61

GC content: 40.1

Gene sequence:

>1920_bases
ATGAATAATTTTTTTGGATTAGATGTAAAAGACCTAGTAGAATTGGCAAAAACTCTAGAAGAAAAAGCCAAATCAGGAGA
AATCAAAACTTCCTTTGAGGTACAGTCTGGACCGATGAGAAATATTCCCAGGCATGGGAATATACCGAGGGGAATGGGAA
GAAGCAATTATCAAGCTCAAACAGGACAGTCTTCACAAGATACTAATTTTACTGTTCAATCCCCAAACAAAGATAGTGTA
ACACAAAACAGAGCTCAAGAGAAAACTAATTCTACAACCTCATCCCCAGAAACTAAATTGAGACCTACCCTAAGAGATAT
CGGGGGTATGTCAGAAGTAATTCAAGAATTAAGAGAAGTTATAGAACTCCCACTCAAACGACCTGATCTGTTGACTAAAT
TAGGACTTGAACCTTCTCGTGGAGTTTTATTAGTTGGACCACCAGGTACAGGTAAAACTCTGACGGCTAAGGCAATAGCA
GAAGAATTGGGGCTAAATTATATTGCCATCAACGGACCAGAAGTGATGAGCAAATATTATGGAGAAGCAGAAGGAAAGTT
ACGGGATATTTTTGCCAAAGCCAAAAAATCTGCTCCTTGTCTGATCTTCATTGATGAAATTGATAGCATTGCTCCAGACC
GCAGTAAAGTTGAGGGAGAAGTCGAAAAGCGATTAGTCGCTCAACTCTTGGGACTGATGGATGGATTTGAAGTTTTAGAG
GGTGTCCTGCTATTAGCAGCAACAAATCGTCCAGACCATATCGATCCAGCTCTTCGTCGTCCAGGGAGGTTTGACCAAGA
GGTTTATTTCCATGTTCCAGATCGCGATGGACGCTCAGAAATTTTGCAGATTCTGACAAAAGCTATGCCATTAGATAATT
CTGTTGATTTGGAAGAAATTGCTGATTTAGCAGTTGGTTTAGTGGGTGCTGACTTAAAGGCTGTATGTCAAAAAGCTGCT
TATTTCGCTCTCCGTCGTGAAGTTCCATCCCTAGAGAACTTAAATATTCAGACTCCAGAAGATATGAGTTTATTGCAAAG
CGACTTACTCAGAGCAATTAAGGAAATTAAACCTTCTATATTAAGGTCTGTGGCAGTAGAAGTACCTAATGTAAGTTGGC
AACATATTGGTGGTCTCGATGTTGTTAAACAAAAATTGCAAGAATCAGTTGAAGGTGCATTGCTCTACCCAGAGTTGTAT
GAGAAGACTAAAGCTAAAGCTCCTAAAGGAATTTTATTATGGGGTGAACCAGGAACTGGAAAAACTTTGTTAGCCAAAGC
TGTTGCTTCTCAAGCACAGGCTAATTTTATTGCGGTAAATGGACCAGAGTTGTTAAGTAAATGGGTAGGAGCGGCAGAAG
AAGCAGTACGAGAACTTTTCTCTAAGGCAAGACAAGTTTCACCTTGTGTGATCTTCATAGATGAAATTGATACTCTAGCT
CCTGCTCGTGGTAAAACGATGGGAGATTCAGGAGTGAGCGATCGCCTAGTTGGTCAACTATTAACGGAATTGGATGGTTT
GCGAGATTGTACTCAGCTCTTATTAGTAGGAGCAACTAATCGTCCTGATGCTCTAGACCCAGCTTTACTTCGAGCGGGGA
GATTGGATTTGCAAATCAAGGTAGACTTACCAGATCAAGCTAGTCGTTTAGAAATTTTGAAGGTTCATAATCAAGATCGC
CCACTGGAAGAAGTCAATTTAGAAGATTGGGCAAGTCGTACAGAAGGTTGGAATGGAGCAGATTTGGCATTGTTGACTAA
TCAAGCTGCTTTAGCCGCAATTCGTAGTTATAGCGCTCAAGGAATTAAGTCTTCTAAGGAAAATGATATCAAGATTACAA
GTGCTGACTTTGAAAATGCTTACAACGCTCTGAAGAGTCAAAAACAGTCTAATAATTTTGATTCTGACATCTGTGTATAA

Upstream 100 bases:

>100_bases
ATTTTATTTGTACTTATGATCATAACTTACTAGAGCCGCTTAAATGTGATAGAATAGCTTATAGACTAAAGTATTAACTT
CAACTATTAAAAATTAAAAA

Downstream 100 bases:

>100_bases
AGTTAGGCCATATCACTCCGGTAGTATTGTTTGTGTATAAAACTAAGTCACAATTGGAATAAACTCTTGTGTCTTAGTGC
CTTCTTCCGCCTTCCCGACA

Product: vesicle-fusing ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 639; Mature: 639

Protein sequence:

>639_residues
MNNFFGLDVKDLVELAKTLEEKAKSGEIKTSFEVQSGPMRNIPRHGNIPRGMGRSNYQAQTGQSSQDTNFTVQSPNKDSV
TQNRAQEKTNSTTSSPETKLRPTLRDIGGMSEVIQELREVIELPLKRPDLLTKLGLEPSRGVLLVGPPGTGKTLTAKAIA
EELGLNYIAINGPEVMSKYYGEAEGKLRDIFAKAKKSAPCLIFIDEIDSIAPDRSKVEGEVEKRLVAQLLGLMDGFEVLE
GVLLLAATNRPDHIDPALRRPGRFDQEVYFHVPDRDGRSEILQILTKAMPLDNSVDLEEIADLAVGLVGADLKAVCQKAA
YFALRREVPSLENLNIQTPEDMSLLQSDLLRAIKEIKPSILRSVAVEVPNVSWQHIGGLDVVKQKLQESVEGALLYPELY
EKTKAKAPKGILLWGEPGTGKTLLAKAVASQAQANFIAVNGPELLSKWVGAAEEAVRELFSKARQVSPCVIFIDEIDTLA
PARGKTMGDSGVSDRLVGQLLTELDGLRDCTQLLLVGATNRPDALDPALLRAGRLDLQIKVDLPDQASRLEILKVHNQDR
PLEEVNLEDWASRTEGWNGADLALLTNQAALAAIRSYSAQGIKSSKENDIKITSADFENAYNALKSQKQSNNFDSDICV

Sequences:

>Translated_639_residues
MNNFFGLDVKDLVELAKTLEEKAKSGEIKTSFEVQSGPMRNIPRHGNIPRGMGRSNYQAQTGQSSQDTNFTVQSPNKDSV
TQNRAQEKTNSTTSSPETKLRPTLRDIGGMSEVIQELREVIELPLKRPDLLTKLGLEPSRGVLLVGPPGTGKTLTAKAIA
EELGLNYIAINGPEVMSKYYGEAEGKLRDIFAKAKKSAPCLIFIDEIDSIAPDRSKVEGEVEKRLVAQLLGLMDGFEVLE
GVLLLAATNRPDHIDPALRRPGRFDQEVYFHVPDRDGRSEILQILTKAMPLDNSVDLEEIADLAVGLVGADLKAVCQKAA
YFALRREVPSLENLNIQTPEDMSLLQSDLLRAIKEIKPSILRSVAVEVPNVSWQHIGGLDVVKQKLQESVEGALLYPELY
EKTKAKAPKGILLWGEPGTGKTLLAKAVASQAQANFIAVNGPELLSKWVGAAEEAVRELFSKARQVSPCVIFIDEIDTLA
PARGKTMGDSGVSDRLVGQLLTELDGLRDCTQLLLVGATNRPDALDPALLRAGRLDLQIKVDLPDQASRLEILKVHNQDR
PLEEVNLEDWASRTEGWNGADLALLTNQAALAAIRSYSAQGIKSSKENDIKITSADFENAYNALKSQKQSNNFDSDICV
>Mature_639_residues
MNNFFGLDVKDLVELAKTLEEKAKSGEIKTSFEVQSGPMRNIPRHGNIPRGMGRSNYQAQTGQSSQDTNFTVQSPNKDSV
TQNRAQEKTNSTTSSPETKLRPTLRDIGGMSEVIQELREVIELPLKRPDLLTKLGLEPSRGVLLVGPPGTGKTLTAKAIA
EELGLNYIAINGPEVMSKYYGEAEGKLRDIFAKAKKSAPCLIFIDEIDSIAPDRSKVEGEVEKRLVAQLLGLMDGFEVLE
GVLLLAATNRPDHIDPALRRPGRFDQEVYFHVPDRDGRSEILQILTKAMPLDNSVDLEEIADLAVGLVGADLKAVCQKAA
YFALRREVPSLENLNIQTPEDMSLLQSDLLRAIKEIKPSILRSVAVEVPNVSWQHIGGLDVVKQKLQESVEGALLYPELY
EKTKAKAPKGILLWGEPGTGKTLLAKAVASQAQANFIAVNGPELLSKWVGAAEEAVRELFSKARQVSPCVIFIDEIDTLA
PARGKTMGDSGVSDRLVGQLLTELDGLRDCTQLLLVGATNRPDALDPALLRAGRLDLQIKVDLPDQASRLEILKVHNQDR
PLEEVNLEDWASRTEGWNGADLALLTNQAALAAIRSYSAQGIKSSKENDIKITSADFENAYNALKSQKQSNNFDSDICV

Specific function: Seems To Act As An ATP-Dependent Zinc Metallopeptidase. Involved In The Degradation Of Sigma-32. Degrades Carboxy- Terminal-Tagged Cytoplasmic Proteins. These Proteins Are Tagged With An 11-Amino-Acid Nonpolar Destabilizing Tail VIa A Mechanism Involving

COG id: COG0464

COG function: function code O; ATPases of the AAA+ class

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AAA ATPase family. CDC48 subfamily [H]

Homologues:

Organism=Homo sapiens, GI6005942, Length=491, Percent_Identity=49.0835030549898, Blast_Score=477, Evalue=1e-134,
Organism=Homo sapiens, GI157671927, Length=539, Percent_Identity=45.0834879406308, Blast_Score=468, Evalue=1e-132,
Organism=Homo sapiens, GI45643125, Length=577, Percent_Identity=40.0346620450607, Blast_Score=405, Evalue=1e-113,
Organism=Homo sapiens, GI45643123, Length=577, Percent_Identity=40.0346620450607, Blast_Score=405, Evalue=1e-113,
Organism=Homo sapiens, GI229577436, Length=549, Percent_Identity=39.8907103825137, Blast_Score=354, Evalue=1e-97,
Organism=Homo sapiens, GI4505725, Length=517, Percent_Identity=33.8491295938104, Blast_Score=257, Evalue=2e-68,
Organism=Homo sapiens, GI194018488, Length=509, Percent_Identity=35.5599214145383, Blast_Score=247, Evalue=3e-65,
Organism=Homo sapiens, GI24497618, Length=524, Percent_Identity=30.1526717557252, Blast_Score=212, Evalue=1e-54,
Organism=Homo sapiens, GI153792536, Length=267, Percent_Identity=41.5730337078652, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI195539395, Length=258, Percent_Identity=40.3100775193798, Blast_Score=202, Evalue=1e-51,
Organism=Homo sapiens, GI4506209, Length=244, Percent_Identity=40.5737704918033, Blast_Score=193, Evalue=3e-49,
Organism=Homo sapiens, GI24497435, Length=227, Percent_Identity=43.1718061674009, Blast_Score=191, Evalue=2e-48,
Organism=Homo sapiens, GI24430155, Length=283, Percent_Identity=37.8091872791519, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI5729991, Length=283, Percent_Identity=37.8091872791519, Blast_Score=188, Evalue=1e-47,
Organism=Homo sapiens, GI89064750, Length=283, Percent_Identity=37.8091872791519, Blast_Score=188, Evalue=2e-47,
Organism=Homo sapiens, GI24430151, Length=226, Percent_Identity=42.4778761061947, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI21361144, Length=242, Percent_Identity=41.3223140495868, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI300192933, Length=235, Percent_Identity=43.8297872340426, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI7657689, Length=229, Percent_Identity=43.6681222707424, Blast_Score=174, Evalue=3e-43,
Organism=Homo sapiens, GI21327685, Length=229, Percent_Identity=43.6681222707424, Blast_Score=173, Evalue=4e-43,
Organism=Homo sapiens, GI31742536, Length=282, Percent_Identity=35.8156028368794, Blast_Score=169, Evalue=9e-42,
Organism=Homo sapiens, GI112789543, Length=282, Percent_Identity=35.8156028368794, Blast_Score=169, Evalue=9e-42,
Organism=Homo sapiens, GI14149767, Length=267, Percent_Identity=39.7003745318352, Blast_Score=166, Evalue=8e-41,
Organism=Homo sapiens, GI62177112, Length=267, Percent_Identity=39.7003745318352, Blast_Score=166, Evalue=8e-41,
Organism=Homo sapiens, GI4507173, Length=241, Percent_Identity=37.344398340249, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI31377644, Length=266, Percent_Identity=37.593984962406, Blast_Score=163, Evalue=5e-40,
Organism=Homo sapiens, GI7019569, Length=247, Percent_Identity=35.6275303643725, Blast_Score=163, Evalue=5e-40,
Organism=Homo sapiens, GI156564401, Length=402, Percent_Identity=30.8457711442786, Blast_Score=162, Evalue=8e-40,
Organism=Homo sapiens, GI5901990, Length=273, Percent_Identity=37.7289377289377, Blast_Score=162, Evalue=1e-39,
Organism=Homo sapiens, GI11875211, Length=260, Percent_Identity=39.6153846153846, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI40806170, Length=260, Percent_Identity=39.6153846153846, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI310125280, Length=261, Percent_Identity=35.2490421455939, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI226371754, Length=283, Percent_Identity=36.0424028268551, Blast_Score=157, Evalue=4e-38,
Organism=Homo sapiens, GI310125282, Length=267, Percent_Identity=34.8314606741573, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI17865802, Length=247, Percent_Identity=34.8178137651822, Blast_Score=153, Evalue=4e-37,
Organism=Homo sapiens, GI64084766, Length=280, Percent_Identity=31.4285714285714, Blast_Score=122, Evalue=8e-28,
Organism=Homo sapiens, GI40806173, Length=141, Percent_Identity=43.9716312056738, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI116292174, Length=250, Percent_Identity=33.2, Blast_Score=94, Evalue=4e-19,
Organism=Escherichia coli, GI1789568, Length=232, Percent_Identity=43.5344827586207, Blast_Score=190, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17532375, Length=508, Percent_Identity=47.6377952755905, Blast_Score=481, Evalue=1e-136,
Organism=Caenorhabditis elegans, GI17531535, Length=509, Percent_Identity=46.7583497053045, Blast_Score=453, Evalue=1e-127,
Organism=Caenorhabditis elegans, GI17537217, Length=590, Percent_Identity=37.1186440677966, Blast_Score=337, Evalue=1e-92,
Organism=Caenorhabditis elegans, GI17508053, Length=499, Percent_Identity=35.6713426853707, Blast_Score=252, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI71987372, Length=226, Percent_Identity=42.0353982300885, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI71987364, Length=226, Percent_Identity=42.0353982300885, Blast_Score=197, Evalue=1e-50,
Organism=Caenorhabditis elegans, GI17554786, Length=229, Percent_Identity=43.6681222707424, Blast_Score=197, Evalue=2e-50,
Organism=Caenorhabditis elegans, GI25144278, Length=229, Percent_Identity=43.2314410480349, Blast_Score=192, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI25153574, Length=256, Percent_Identity=40.625, Blast_Score=191, Evalue=8e-49,
Organism=Caenorhabditis elegans, GI25144281, Length=229, Percent_Identity=42.7947598253275, Blast_Score=191, Evalue=9e-49,
Organism=Caenorhabditis elegans, GI17562804, Length=236, Percent_Identity=45.3389830508475, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI193209502, Length=250, Percent_Identity=40.8, Blast_Score=189, Evalue=5e-48,
Organism=Caenorhabditis elegans, GI17563248, Length=244, Percent_Identity=40.5737704918033, Blast_Score=188, Evalue=6e-48,
Organism=Caenorhabditis elegans, GI193206116, Length=270, Percent_Identity=37.7777777777778, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI193206114, Length=270, Percent_Identity=37.7777777777778, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI133931034, Length=270, Percent_Identity=37.7777777777778, Blast_Score=187, Evalue=1e-47,
Organism=Caenorhabditis elegans, GI17563250, Length=226, Percent_Identity=42.9203539823009, Blast_Score=184, Evalue=8e-47,
Organism=Caenorhabditis elegans, GI17508701, Length=288, Percent_Identity=37.1527777777778, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17554784, Length=272, Percent_Identity=40.4411764705882, Blast_Score=181, Evalue=1e-45,
Organism=Caenorhabditis elegans, GI17505546, Length=241, Percent_Identity=40.2489626556017, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI133901662, Length=284, Percent_Identity=36.9718309859155, Blast_Score=166, Evalue=4e-41,
Organism=Caenorhabditis elegans, GI133901658, Length=284, Percent_Identity=36.9718309859155, Blast_Score=165, Evalue=6e-41,
Organism=Caenorhabditis elegans, GI71994521, Length=280, Percent_Identity=38.5714285714286, Blast_Score=157, Evalue=1e-38,
Organism=Caenorhabditis elegans, GI25146157, Length=262, Percent_Identity=37.0229007633588, Blast_Score=155, Evalue=7e-38,
Organism=Caenorhabditis elegans, GI17554264, Length=212, Percent_Identity=41.5094339622642, Blast_Score=154, Evalue=9e-38,
Organism=Caenorhabditis elegans, GI17541224, Length=302, Percent_Identity=34.1059602649007, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI17541226, Length=251, Percent_Identity=37.8486055776892, Blast_Score=154, Evalue=1e-37,
Organism=Caenorhabditis elegans, GI115534323, Length=233, Percent_Identity=37.7682403433476, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI86561515, Length=237, Percent_Identity=35.8649789029536, Blast_Score=149, Evalue=5e-36,
Organism=Caenorhabditis elegans, GI17560432, Length=354, Percent_Identity=33.3333333333333, Blast_Score=147, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17508421, Length=237, Percent_Identity=38.8185654008439, Blast_Score=144, Evalue=1e-34,
Organism=Caenorhabditis elegans, GI32563584, Length=268, Percent_Identity=36.9402985074627, Blast_Score=144, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI71990294, Length=203, Percent_Identity=33.0049261083744, Blast_Score=77, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6320077, Length=530, Percent_Identity=47.1698113207547, Blast_Score=489, Evalue=1e-139,
Organism=Saccharomyces cerevisiae, GI6323429, Length=495, Percent_Identity=44.6464646464646, Blast_Score=421, Evalue=1e-118,
Organism=Saccharomyces cerevisiae, GI6322994, Length=605, Percent_Identity=38.3471074380165, Blast_Score=410, Evalue=1e-115,
Organism=Saccharomyces cerevisiae, GI6324000, Length=569, Percent_Identity=30.2284710017575, Blast_Score=224, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6321709, Length=270, Percent_Identity=42.5925925925926, Blast_Score=219, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6322651, Length=371, Percent_Identity=33.9622641509434, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6324833, Length=227, Percent_Identity=44.0528634361233, Blast_Score=198, Evalue=3e-51,
Organism=Saccharomyces cerevisiae, GI6321390, Length=223, Percent_Identity=43.4977578475336, Blast_Score=195, Evalue=2e-50,
Organism=Saccharomyces cerevisiae, GI6322704, Length=251, Percent_Identity=39.4422310756972, Blast_Score=188, Evalue=2e-48,
Organism=Saccharomyces cerevisiae, GI6320197, Length=268, Percent_Identity=37.6865671641791, Blast_Score=181, Evalue=3e-46,
Organism=Saccharomyces cerevisiae, GI6324691, Length=266, Percent_Identity=39.0977443609023, Blast_Score=179, Evalue=8e-46,
Organism=Saccharomyces cerevisiae, GI6320602, Length=273, Percent_Identity=38.8278388278388, Blast_Score=179, Evalue=1e-45,
Organism=Saccharomyces cerevisiae, GI6320854, Length=260, Percent_Identity=40.3846153846154, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6319554, Length=418, Percent_Identity=30.3827751196172, Blast_Score=175, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6325431, Length=245, Percent_Identity=37.9591836734694, Blast_Score=170, Evalue=6e-43,
Organism=Saccharomyces cerevisiae, GI6325281, Length=243, Percent_Identity=38.2716049382716, Blast_Score=168, Evalue=2e-42,
Organism=Saccharomyces cerevisiae, GI6321465, Length=234, Percent_Identity=40.5982905982906, Blast_Score=167, Evalue=5e-42,
Organism=Saccharomyces cerevisiae, GI6323736, Length=231, Percent_Identity=41.1255411255411, Blast_Score=163, Evalue=6e-41,
Organism=Saccharomyces cerevisiae, GI6325183, Length=298, Percent_Identity=33.8926174496644, Blast_Score=153, Evalue=9e-38,
Organism=Saccharomyces cerevisiae, GI6320887, Length=283, Percent_Identity=30.3886925795053, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI17137560, Length=549, Percent_Identity=45.3551912568306, Blast_Score=481, Evalue=1e-136,
Organism=Drosophila melanogaster, GI161076486, Length=549, Percent_Identity=45.3551912568306, Blast_Score=481, Evalue=1e-136,
Organism=Drosophila melanogaster, GI161076488, Length=549, Percent_Identity=45.3551912568306, Blast_Score=480, Evalue=1e-135,
Organism=Drosophila melanogaster, GI19921202, Length=580, Percent_Identity=36.0344827586207, Blast_Score=310, Evalue=3e-84,
Organism=Drosophila melanogaster, GI281365776, Length=282, Percent_Identity=42.9078014184397, Blast_Score=236, Evalue=5e-62,
Organism=Drosophila melanogaster, GI24660075, Length=282, Percent_Identity=42.9078014184397, Blast_Score=235, Evalue=5e-62,
Organism=Drosophila melanogaster, GI45552965, Length=282, Percent_Identity=42.9078014184397, Blast_Score=235, Evalue=8e-62,
Organism=Drosophila melanogaster, GI24656825, Length=507, Percent_Identity=32.1499013806706, Blast_Score=231, Evalue=1e-60,
Organism=Drosophila melanogaster, GI21355121, Length=505, Percent_Identity=31.0891089108911, Blast_Score=226, Evalue=5e-59,
Organism=Drosophila melanogaster, GI24656820, Length=526, Percent_Identity=30.9885931558935, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI281363136, Length=532, Percent_Identity=31.390977443609, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI78707192, Length=532, Percent_Identity=31.390977443609, Blast_Score=217, Evalue=2e-56,
Organism=Drosophila melanogaster, GI24652279, Length=229, Percent_Identity=47.1615720524017, Blast_Score=202, Evalue=7e-52,
Organism=Drosophila melanogaster, GI17137738, Length=244, Percent_Identity=41.3934426229508, Blast_Score=196, Evalue=3e-50,
Organism=Drosophila melanogaster, GI18860063, Length=233, Percent_Identity=42.9184549356223, Blast_Score=195, Evalue=7e-50,
Organism=Drosophila melanogaster, GI24640100, Length=258, Percent_Identity=39.5348837209302, Blast_Score=194, Evalue=1e-49,
Organism=Drosophila melanogaster, GI19920408, Length=226, Percent_Identity=43.3628318584071, Blast_Score=194, Evalue=2e-49,
Organism=Drosophila melanogaster, GI24663015, Length=257, Percent_Identity=39.6887159533074, Blast_Score=193, Evalue=3e-49,
Organism=Drosophila melanogaster, GI281361487, Length=258, Percent_Identity=40.6976744186046, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24651451, Length=269, Percent_Identity=38.6617100371747, Blast_Score=190, Evalue=3e-48,
Organism=Drosophila melanogaster, GI24649446, Length=263, Percent_Identity=38.7832699619772, Blast_Score=184, Evalue=1e-46,
Organism=Drosophila melanogaster, GI17738151, Length=240, Percent_Identity=41.25, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI24658770, Length=258, Percent_Identity=42.2480620155039, Blast_Score=178, Evalue=1e-44,
Organism=Drosophila melanogaster, GI24639391, Length=243, Percent_Identity=40.7407407407407, Blast_Score=173, Evalue=3e-43,
Organism=Drosophila melanogaster, GI24665814, Length=263, Percent_Identity=40.3041825095057, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI28574878, Length=263, Percent_Identity=40.3041825095057, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI18859657, Length=247, Percent_Identity=38.4615384615385, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24644145, Length=248, Percent_Identity=39.1129032258064, Blast_Score=166, Evalue=5e-41,
Organism=Drosophila melanogaster, GI17864540, Length=387, Percent_Identity=32.5581395348837, Blast_Score=163, Evalue=3e-40,
Organism=Drosophila melanogaster, GI28573010, Length=376, Percent_Identity=31.6489361702128, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI28571849, Length=261, Percent_Identity=39.463601532567, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI28571847, Length=261, Percent_Identity=39.463601532567, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI281360136, Length=226, Percent_Identity=39.3805309734513, Blast_Score=158, Evalue=9e-39,
Organism=Drosophila melanogaster, GI24644411, Length=226, Percent_Identity=39.3805309734513, Blast_Score=158, Evalue=9e-39,
Organism=Drosophila melanogaster, GI281360144, Length=226, Percent_Identity=39.3805309734513, Blast_Score=158, Evalue=9e-39,
Organism=Drosophila melanogaster, GI281360140, Length=226, Percent_Identity=39.3805309734513, Blast_Score=158, Evalue=9e-39,
Organism=Drosophila melanogaster, GI281360146, Length=226, Percent_Identity=39.3805309734513, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281360138, Length=226, Percent_Identity=39.3805309734513, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI281360142, Length=226, Percent_Identity=39.3805309734513, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI21357333, Length=226, Percent_Identity=39.3805309734513, Blast_Score=157, Evalue=2e-38,
Organism=Drosophila melanogaster, GI24581396, Length=259, Percent_Identity=35.9073359073359, Blast_Score=156, Evalue=5e-38,
Organism=Drosophila melanogaster, GI20129423, Length=276, Percent_Identity=34.0579710144928, Blast_Score=155, Evalue=6e-38,
Organism=Drosophila melanogaster, GI20129529, Length=226, Percent_Identity=38.9380530973451, Blast_Score=154, Evalue=1e-37,
Organism=Drosophila melanogaster, GI45554047, Length=165, Percent_Identity=44.8484848484849, Blast_Score=135, Evalue=9e-32,
Organism=Drosophila melanogaster, GI24639486, Length=271, Percent_Identity=30.6273062730627, Blast_Score=127, Evalue=3e-29,
Organism=Drosophila melanogaster, GI28573181, Length=200, Percent_Identity=31.5, Blast_Score=82, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003593
- InterPro:   IPR005938
- InterPro:   IPR003959
- InterPro:   IPR003960
- InterPro:   IPR003338
- InterPro:   IPR004201
- InterPro:   IPR015415 [H]

Pfam domain/function: PF00004 AAA; PF02933 CDC48_2; PF02359 CDC48_N; PF09336 Vps4_C [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 69896; Mature: 69896

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00674 AAA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFFGLDVKDLVELAKTLEEKAKSGEIKTSFEVQSGPMRNIPRHGNIPRGMGRSNYQAQ
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
TGQSSQDTNFTVQSPNKDSVTQNRAQEKTNSTTSSPETKLRPTLRDIGGMSEVIQELREV
CCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHCHHHHHHCCHHHHHHHHHHH
IELPLKRPDLLTKLGLEPSRGVLLVGPPGTGKTLTAKAIAEELGLNYIAINGPEVMSKYY
HHCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHH
GEAEGKLRDIFAKAKKSAPCLIFIDEIDSIAPDRSKVEGEVEKRLVAQLLGLMDGFEVLE
CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLLLAATNRPDHIDPALRRPGRFDQEVYFHVPDRDGRSEILQILTKAMPLDNSVDLEEI
HHHEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHH
ADLAVGLVGADLKAVCQKAAYFALRREVPSLENLNIQTPEDMSLLQSDLLRAIKEIKPSI
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRSVAVEVPNVSWQHIGGLDVVKQKLQESVEGALLYPELYEKTKAKAPKGILLWGEPGTG
HHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCEEECHHHHHHHHCCCCCCEEEECCCCCC
KTLLAKAVASQAQANFIAVNGPELLSKWVGAAEEAVRELFSKARQVSPCVIFIDEIDTLA
HHHHHHHHHHHHCCCEEEECCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECHHHCC
PARGKTMGDSGVSDRLVGQLLTELDGLRDCTQLLLVGATNRPDALDPALLRAGRLDLQIK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEE
VDLPDQASRLEILKVHNQDRPLEEVNLEDWASRTEGWNGADLALLTNQAALAAIRSYSAQ
ECCCCCCHHHHHHEECCCCCCHHHCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHH
GIKSSKENDIKITSADFENAYNALKSQKQSNNFDSDICV
CCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MNNFFGLDVKDLVELAKTLEEKAKSGEIKTSFEVQSGPMRNIPRHGNIPRGMGRSNYQAQ
CCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
TGQSSQDTNFTVQSPNKDSVTQNRAQEKTNSTTSSPETKLRPTLRDIGGMSEVIQELREV
CCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHCHHHHHHCCHHHHHHHHHHH
IELPLKRPDLLTKLGLEPSRGVLLVGPPGTGKTLTAKAIAEELGLNYIAINGPEVMSKYY
HHCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHCCCEEEECCHHHHHHHH
GEAEGKLRDIFAKAKKSAPCLIFIDEIDSIAPDRSKVEGEVEKRLVAQLLGLMDGFEVLE
CCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GVLLLAATNRPDHIDPALRRPGRFDQEVYFHVPDRDGRSEILQILTKAMPLDNSVDLEEI
HHHEEEECCCCCCCCHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCHHHH
ADLAVGLVGADLKAVCQKAAYFALRREVPSLENLNIQTPEDMSLLQSDLLRAIKEIKPSI
HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
LRSVAVEVPNVSWQHIGGLDVVKQKLQESVEGALLYPELYEKTKAKAPKGILLWGEPGTG
HHHHHHHCCCCCHHHCCCHHHHHHHHHHHHCCEEECHHHHHHHHCCCCCCEEEECCCCCC
KTLLAKAVASQAQANFIAVNGPELLSKWVGAAEEAVRELFSKARQVSPCVIFIDEIDTLA
HHHHHHHHHHHHCCCEEEECCHHHHHHHHCHHHHHHHHHHHHHHCCCCEEEEEECHHHCC
PARGKTMGDSGVSDRLVGQLLTELDGLRDCTQLLLVGATNRPDALDPALLRAGRLDLQIK
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEE
VDLPDQASRLEILKVHNQDRPLEEVNLEDWASRTEGWNGADLALLTNQAALAAIRSYSAQ
ECCCCCCHHHHHHEECCCCCCHHHCCHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHH
GIKSSKENDIKITSADFENAYNALKSQKQSNNFDSDICV
CCCCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Metalloendopeptidases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]