Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113475952
Identifier: 113475952
GI number: 113475952
Start: 3590161
End: 3591117
Strand: Reverse
Name: 113475952
Synonym: Tery_2317
Alternate gene names: NA
Gene position: 3591117-3590161 (Counterclockwise)
Preceding gene: 113475955
Following gene: 113475951
Centisome position: 46.34
GC content: 34.06
Gene sequence:
>957_bases ATGTTTAATTCAACACAAATCTTAATAGAGACTTTTGTCAAAGAGCTACAAGCAGGATACCATCGTACCTATGGTGGCTT TAAACCAGACTATCCAGAAATTATTGCCTGGGCCGGAAATATGGCTTTGGAAAACATCGCTAATTGTGACGCATTATATC ATAATATTGAACACACAATGTTAGTTACTCTTGTGGGGCAAGAAATTTTGCGGGGTAAGCACATTCGAGAAGGTGGTGTT TCTCCAGAAGATTGGTTACATTATATTATTTCTTTATTGTGTCATGATATTGGTTATACTAAAGGACTATGTAGAGAAGA CCAAGAATTATTAGGTCTATATGCTACTGGAATAGATGGTGGGATGGTATCTTTGGCAGATGGTAGTACGGCGGCTAGTT TAACACCTTATCATGTTGACCGGGGTAAATTAGCAATAGATGAACGTTTTGGTGGTCATCGATTAATTGATGCAGCTCAA ATTAAACGTAATATTGAATTAACTCGTTTTCCTGTTCCAGAAGCAGAAACTTATCAAGATAGAAATAATTTTTCTGGGTT ATCAAGGGCTGCAGATTTAATTGGTCAATTAAGTGACCCTAATTATTTGCTCAAAATTAGTGCTTTGTTTTATGAGTTTG AAGAAGTAGGTACTAATAAAATTTTAGGTTATAAATGTCCTGGAGATCTCCGACGCAGTTACGCGAAATTTTACTGGAAT GGAGTTTATCCCTATATTCCTGCTGCTCTTAGTTATTTGGAATTAACTCAAAGTGGAAAACAAATTATTGCTAATCTCTA TGCAAATGTATTTCAAATAGAACATGGACCTCAAACAAAACTTCATAGTACAACATCAGAAAATGATGATTATCAAAGTC ACCATAATGGAGATTTCAAAATTGAACTGCCAACTATAGAAAAGAAATTTAGTGATTTTTTAGATTTAAATTTATAA
Upstream 100 bases:
>100_bases AATTAATTGTAAAAGCAAGTTCTAATCAATTAATAATAGCTAACTGCTAAAGCTCAAGCTATCAGGATAACACTTAATAC TGGAGTGCAAAAAAATAGTA
Downstream 100 bases:
>100_bases GTAGATATAGGCAGCAATTTAAGAATCATATAAATCAATTTATACCATTTATATATGATGTATTTTGAGTGAAATTATTA AGTAATTTCATTGCTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 318; Mature: 318
Protein sequence:
>318_residues MFNSTQILIETFVKELQAGYHRTYGGFKPDYPEIIAWAGNMALENIANCDALYHNIEHTMLVTLVGQEILRGKHIREGGV SPEDWLHYIISLLCHDIGYTKGLCREDQELLGLYATGIDGGMVSLADGSTAASLTPYHVDRGKLAIDERFGGHRLIDAAQ IKRNIELTRFPVPEAETYQDRNNFSGLSRAADLIGQLSDPNYLLKISALFYEFEEVGTNKILGYKCPGDLRRSYAKFYWN GVYPYIPAALSYLELTQSGKQIIANLYANVFQIEHGPQTKLHSTTSENDDYQSHHNGDFKIELPTIEKKFSDFLDLNL
Sequences:
>Translated_318_residues MFNSTQILIETFVKELQAGYHRTYGGFKPDYPEIIAWAGNMALENIANCDALYHNIEHTMLVTLVGQEILRGKHIREGGV SPEDWLHYIISLLCHDIGYTKGLCREDQELLGLYATGIDGGMVSLADGSTAASLTPYHVDRGKLAIDERFGGHRLIDAAQ IKRNIELTRFPVPEAETYQDRNNFSGLSRAADLIGQLSDPNYLLKISALFYEFEEVGTNKILGYKCPGDLRRSYAKFYWN GVYPYIPAALSYLELTQSGKQIIANLYANVFQIEHGPQTKLHSTTSENDDYQSHHNGDFKIELPTIEKKFSDFLDLNL >Mature_318_residues MFNSTQILIETFVKELQAGYHRTYGGFKPDYPEIIAWAGNMALENIANCDALYHNIEHTMLVTLVGQEILRGKHIREGGV SPEDWLHYIISLLCHDIGYTKGLCREDQELLGLYATGIDGGMVSLADGSTAASLTPYHVDRGKLAIDERFGGHRLIDAAQ IKRNIELTRFPVPEAETYQDRNNFSGLSRAADLIGQLSDPNYLLKISALFYEFEEVGTNKILGYKCPGDLRRSYAKFYWN GVYPYIPAALSYLELTQSGKQIIANLYANVFQIEHGPQTKLHSTTSENDDYQSHHNGDFKIELPTIEKKFSDFLDLNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35880; Mature: 35880
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNSTQILIETFVKELQAGYHRTYGGFKPDYPEIIAWAGNMALENIANCDALYHNIEHTM CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LVTLVGQEILRGKHIREGGVSPEDWLHYIISLLCHDIGYTKGLCREDQELLGLYATGIDG HHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCC GMVSLADGSTAASLTPYHVDRGKLAIDERFGGHRLIDAAQIKRNIELTRFPVPEAETYQD CEEEECCCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCHHHCC RNNFSGLSRAADLIGQLSDPNYLLKISALFYEFEEVGTNKILGYKCPGDLRRSYAKFYWN CCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHC GVYPYIPAALSYLELTQSGKQIIANLYANVFQIEHGPQTKLHSTTSENDDYQSHHNGDFK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHCCCCCEE IELPTIEKKFSDFLDLNL EECCHHHHHHHHHHCCCC >Mature Secondary Structure MFNSTQILIETFVKELQAGYHRTYGGFKPDYPEIIAWAGNMALENIANCDALYHNIEHTM CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHH LVTLVGQEILRGKHIREGGVSPEDWLHYIISLLCHDIGYTKGLCREDQELLGLYATGIDG HHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHEECCCC GMVSLADGSTAASLTPYHVDRGKLAIDERFGGHRLIDAAQIKRNIELTRFPVPEAETYQD CEEEECCCCCCCCCCCEEECCCCEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCHHHCC RNNFSGLSRAADLIGQLSDPNYLLKISALFYEFEEVGTNKILGYKCPGDLRRSYAKFYWN CCCCCHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHC GVYPYIPAALSYLELTQSGKQIIANLYANVFQIEHGPQTKLHSTTSENDDYQSHHNGDFK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCHHCCCCCEE IELPTIEKKFSDFLDLNL EECCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA