| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475832
Identifier: 113475832
GI number: 113475832
Start: 3417555
End: 3417857
Strand: Reverse
Name: 113475832
Synonym: Tery_2190
Alternate gene names: NA
Gene position: 3417857-3417555 (Counterclockwise)
Preceding gene: 113475833
Following gene: 113475831
Centisome position: 44.1
GC content: 33.66
Gene sequence:
>303_bases ATGAGTAATAAAGATAGTTTTGTGAGTGGTTTAATTGCGGGGGCAGCATTTGGTAGCTTGGCTGGTGGATTATTAGGAAT TTTAATTGGAACAAGTATATCTGATGATCCTGAATTAGTAGAAAATCTATTAGATAGTCAAGATACAGAAAAACAAAAAT CAATAACAGAATTAGACAGTACAGAAGTAGCTCATCAGAGTTTAGAAGCTCAAATAGCACAGTTGAATCAAGCAATTGAT GAAGTGCGTCAACAAATAGACAATGTTAATGGAAATTTGATAAATACTGATCGATCGCTCTGA
Upstream 100 bases:
>100_bases AAGACTTACCTAATCTTAATTAAATTTTGACATTAAATTTCATAATCTGTTATTCTAGATATATAAACATGTAATATAAG TAATTAGCTATTTGCTAAAT
Downstream 100 bases:
>100_bases AGAAATTTCCACTAAATATCTAATAAATATCTAAATTTTAGAATATATAAAATTGTTCGTAATATACTGATTTTATAGCC ATCTAAAGCGAAAAATCATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSNKDSFVSGLIAGAAFGSLAGGLLGILIGTSISDDPELVENLLDSQDTEKQKSITELDSTEVAHQSLEAQIAQLNQAID EVRQQIDNVNGNLINTDRSL
Sequences:
>Translated_100_residues MSNKDSFVSGLIAGAAFGSLAGGLLGILIGTSISDDPELVENLLDSQDTEKQKSITELDSTEVAHQSLEAQIAQLNQAID EVRQQIDNVNGNLINTDRSL >Mature_99_residues SNKDSFVSGLIAGAAFGSLAGGLLGILIGTSISDDPELVENLLDSQDTEKQKSITELDSTEVAHQSLEAQIAQLNQAIDE VRQQIDNVNGNLINTDRSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10612; Mature: 10481
Theoretical pI: Translated: 3.81; Mature: 3.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKDSFVSGLIAGAAFGSLAGGLLGILIGTSISDDPELVENLLDSQDTEKQKSITELDS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH TEVAHQSLEAQIAQLNQAIDEVRQQIDNVNGNLINTDRSL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SNKDSFVSGLIAGAAFGSLAGGLLGILIGTSISDDPELVENLLDSQDTEKQKSITELDS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHH TEVAHQSLEAQIAQLNQAIDEVRQQIDNVNGNLINTDRSL HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA