| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113475831
Identifier: 113475831
GI number: 113475831
Start: 3416553
End: 3416843
Strand: Reverse
Name: 113475831
Synonym: Tery_2189
Alternate gene names: NA
Gene position: 3416843-3416553 (Counterclockwise)
Preceding gene: 113475832
Following gene: 113475828
Centisome position: 44.09
GC content: 34.36
Gene sequence:
>291_bases ATGAGTGCTTCCATAGGAATATTAGTCGGGACGTTAACAACATTTATAAACATCTATTTGGTTCTGATGTTCATTCGGAT TTTGTTAAGTTGGTTCCCTAATGTTAACTGGTATGATCCACCATTTTCTGTATTGAGTCAGTTGACAGACCCTTATCTAA ATGTATTTCGTTCTGTTATTCCACCCTTGGGAGGTATTGACTTTTCTCCAATAATTGCTATATTTGCTCTCCAATTTGGA GCTCAATTTTTAACTGGATTACTTAATAGCTTGATTTTGCCAGTTTATTAA
Upstream 100 bases:
>100_bases GAATTGTTAACAATTGTTAGTACTCATAGTATTGGTAAAGCTATGCTAATATCTATTGTATAATTATGTATTTGTAGTTT CACGAAAAATAAAAATACTT
Downstream 100 bases:
>100_bases TATCTACAATCTTTCATGAGAAAAAACTTTGGGGCAGATGATCAAAAGGTATTTATTCCTATAATTCTATCTGCCTTTAA TCATTAAAATCCATCAAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 95
Protein sequence:
>96_residues MSASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVIPPLGGIDFSPIIAIFALQFG AQFLTGLLNSLILPVY
Sequences:
>Translated_96_residues MSASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVIPPLGGIDFSPIIAIFALQFG AQFLTGLLNSLILPVY >Mature_95_residues SASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVIPPLGGIDFSPIIAIFALQFGA QFLTGLLNSLILPVY
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10711; Mature: 10580
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC PPLGGIDFSPIIAIFALQFGAQFLTGLLNSLILPVY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC PPLGGIDFSPIIAIFALQFGAQFLTGLLNSLILPVY CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA