Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475831

Identifier: 113475831

GI number: 113475831

Start: 3416553

End: 3416843

Strand: Reverse

Name: 113475831

Synonym: Tery_2189

Alternate gene names: NA

Gene position: 3416843-3416553 (Counterclockwise)

Preceding gene: 113475832

Following gene: 113475828

Centisome position: 44.09

GC content: 34.36

Gene sequence:

>291_bases
ATGAGTGCTTCCATAGGAATATTAGTCGGGACGTTAACAACATTTATAAACATCTATTTGGTTCTGATGTTCATTCGGAT
TTTGTTAAGTTGGTTCCCTAATGTTAACTGGTATGATCCACCATTTTCTGTATTGAGTCAGTTGACAGACCCTTATCTAA
ATGTATTTCGTTCTGTTATTCCACCCTTGGGAGGTATTGACTTTTCTCCAATAATTGCTATATTTGCTCTCCAATTTGGA
GCTCAATTTTTAACTGGATTACTTAATAGCTTGATTTTGCCAGTTTATTAA

Upstream 100 bases:

>100_bases
GAATTGTTAACAATTGTTAGTACTCATAGTATTGGTAAAGCTATGCTAATATCTATTGTATAATTATGTATTTGTAGTTT
CACGAAAAATAAAAATACTT

Downstream 100 bases:

>100_bases
TATCTACAATCTTTCATGAGAAAAAACTTTGGGGCAGATGATCAAAAGGTATTTATTCCTATAATTCTATCTGCCTTTAA
TCATTAAAATCCATCAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MSASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVIPPLGGIDFSPIIAIFALQFG
AQFLTGLLNSLILPVY

Sequences:

>Translated_96_residues
MSASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVIPPLGGIDFSPIIAIFALQFG
AQFLTGLLNSLILPVY
>Mature_95_residues
SASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVIPPLGGIDFSPIIAIFALQFGA
QFLTGLLNSLILPVY

Specific function: Unknown

COG id: COG0762

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10711; Mature: 10580

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PPLGGIDFSPIIAIFALQFGAQFLTGLLNSLILPVY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SASIGILVGTLTTFINIYLVLMFIRILLSWFPNVNWYDPPFSVLSQLTDPYLNVFRSVI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
PPLGGIDFSPIIAIFALQFGAQFLTGLLNSLILPVY
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA