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The map label for this gene is 113475465

Identifier: 113475465

GI number: 113475465

Start: 2740494

End: 2740937

Strand: Reverse

Name: 113475465

Synonym: Tery_1794

Alternate gene names: NA

Gene position: 2740937-2740494 (Counterclockwise)

Preceding gene: 113475466

Following gene: 113475464

Centisome position: 35.37

GC content: 38.51

Gene sequence:

>444_bases
ATGTTAAACAAACGGTCGATAGTAGCATGGGTAATAGTGCTGTTAGTAGCATTTTTGGCAAGTTGTAGTTCTCCGACTCC
ACCGCTAACCTACTCAGATGCTCAGTTACAAAAAATAGAAGTATCTGAATCAGGAATACAGGCTTTACGCGATCGCATGG
ATGAACTAGAAAGCCTAATTCAGAAAGGCGAATGGGTAAATATTCGTACATTTATCCACGGGCCTTTGGGAGATTTGCGG
AGTAAGACTAATTATCTCACCCAAAGTCTACTGTTGCCAAGAGATAAAACACCTGTACTGAATGCAGCAAAAAAGATATT
TGATGACTTAGAGGATATTGATACAGCAGCAACAGAAGGCAATAAAAAACAAGCTCTGAGCGAGTACAAAAAAGCAATAG
CTGATTTTGATGCTTTCTTAGATTTAGTGCCAAAAAATAGTTAA

Upstream 100 bases:

>100_bases
CAATAAGTAAGTAAATATACTTCCTATTGCCAAAAAAGTCATTTCCATCTTAAATCTAAGAATAGAATACTAAAATTAGC
TTTGACAAACAAAAAAGATT

Downstream 100 bases:

>100_bases
ATAGTTTTCAGTAGTTATAGCTTTTATCATTTAGCTATCAGCTATCATATCAAGTAAAAACTATTGGTTTTCAAGGATTT
CAATTTTCTCAATTTCCTCA

Product: hypothetical protein

Products: NA

Alternate protein names: Photosystem II Protein Q; Photosystem II Extrinsic Protein

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MLNKRSIVAWVIVLLVAFLASCSSPTPPLTYSDAQLQKIEVSESGIQALRDRMDELESLIQKGEWVNIRTFIHGPLGDLR
SKTNYLTQSLLLPRDKTPVLNAAKKIFDDLEDIDTAATEGNKKQALSEYKKAIADFDAFLDLVPKNS

Sequences:

>Translated_147_residues
MLNKRSIVAWVIVLLVAFLASCSSPTPPLTYSDAQLQKIEVSESGIQALRDRMDELESLIQKGEWVNIRTFIHGPLGDLR
SKTNYLTQSLLLPRDKTPVLNAAKKIFDDLEDIDTAATEGNKKQALSEYKKAIADFDAFLDLVPKNS
>Mature_147_residues
MLNKRSIVAWVIVLLVAFLASCSSPTPPLTYSDAQLQKIEVSESGIQALRDRMDELESLIQKGEWVNIRTFIHGPLGDLR
SKTNYLTQSLLLPRDKTPVLNAAKKIFDDLEDIDTAATEGNKKQALSEYKKAIADFDAFLDLVPKNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16392; Mature: 16392

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKRSIVAWVIVLLVAFLASCSSPTPPLTYSDAQLQKIEVSESGIQALRDRMDELESLI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKGEWVNIRTFIHGPLGDLRSKTNYLTQSLLLPRDKTPVLNAAKKIFDDLEDIDTAATEG
HCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
NKKQALSEYKKAIADFDAFLDLVPKNS
CHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLNKRSIVAWVIVLLVAFLASCSSPTPPLTYSDAQLQKIEVSESGIQALRDRMDELESLI
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QKGEWVNIRTFIHGPLGDLRSKTNYLTQSLLLPRDKTPVLNAAKKIFDDLEDIDTAATEG
HCCCCEEEHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
NKKQALSEYKKAIADFDAFLDLVPKNS
CHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA