Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113475464

Identifier: 113475464

GI number: 113475464

Start: 2738086

End: 2739255

Strand: Reverse

Name: 113475464

Synonym: Tery_1793

Alternate gene names: NA

Gene position: 2739255-2738086 (Counterclockwise)

Preceding gene: 113475465

Following gene: 113475462

Centisome position: 35.34

GC content: 40.43

Gene sequence:

>1170_bases
ATGAGTCATATAGTAATTATTGGATGTGGAGTAGTTGGAGCAACGATCGCTTATCAACTCAGCAAAATAGAAGGTTTAAA
AATTACAGTCTTAGATAAACAAATGCCTGCTCAAGGATCTACGGGTGCTGCTTTGGGTGTTTTGATGGGAGTTATTAGTC
AAAAAGCTAAAGGCAGACCTTGGAAAATGAGACGCATGAGTGTGCAAGCTTATCACAATTTAATTCCTGAGCTAGAAGCC
AAAATAAATCGCTCTATTTCTCACAACCGTCAAGGTATTTTACAGTTGTGTTTGCCTGGGGAAGATCTCGACAAGTGGCA
AAGATTAATAAATATTCGAGAAGCAGATGATTTGCCATTAGAAATGTGGGATGTAGAACGACTAGGCGATCGCTGCCCCC
AGCTCCAAATATCAGAGGTGATAGCAGCTATTTATTCTCCCGAAGATTTACAAGTTAACCCTGTTGAATTAACTTTAGCT
TTAGTAGAAGCGGCTCAACAAAATGGTGTGAATTTTCATTTTGGGGTCACAGTTGCTGAATATAAGACTATTTCTCTGCC
AAGAAATGAATATCGTTGTCGCCAAGTATCTATAAAAAATTTGGATGAGACAAAAAAAACTCCTACTTTGCCAGATGTAG
ACTGGTTAGTTGTTGCCGCCGGCTTGGGTTCATTACCATGTTTACAAGGAATAAAAGGGGGTAAGCTACGCTCTTTGCAA
CTCAAGCGCAAGTCTAATGTTGATAATAGATTTACTCTAATACCTGTATTAGGTCAAGCTTTACATCTGCAAGTGTCAAC
GCTTTTAGGAAAGTCAGATTTTCAACCAGTGATCACTGGGGATGATGTGCATATTATACCAGTAGCAGAAAATGAATATT
GGGTGGGAGCAACAGTTGAATTTCCCAACGATATCGGTGAGGTGGTAGCTGACTCCAGTTTATTAGATCACGTGATGGCG
AGAGCAATTAGTTTTTGTCCGGGTTTAGCAGATGCAAATATTCTTAGGAAATGGTCTGGTTTACGACCTCGTCCAGAAGG
TCAAGCTGCTCCTGCAGTTGGTTATCTGGAAGGTTGGCGAAATATATTGTTGGCAACAGGTCATTATCGGAATGGGGTGT
TGTTAGCTCCAGCAACAGCAGAGGCAGTTGAAAAAATGATTGTCAAGTAA

Upstream 100 bases:

>100_bases
TGAAATTTCTGAAGTTTGACAAAAAGTTAGCATTAATGCATGAATTGGTATTACTTGAGCTTAAAGCCATAGTAAATTGA
TATTTTTTAAATTATTCAAA

Downstream 100 bases:

>100_bases
TATCATGTCAGCTTTAATACTTACACTTGACTTTGTTGGATGAAAGTGGCAATATAATTACTGTACTTGCTCTGCTAAGG
TGACAGCCCTTCTTAGTTAT

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: Glycine Oxidase ThiO; Glycine Oxidase; D-Amino Acid Oxidase; FAD-Dependent Glycine Oxidase; Glycine/D-Amino Acid Oxidase; Glycine/D-Amino Acid Oxidases; Glycine Oxidase Thio; Glycine Cleavage T-Protein; FAD-Dependent Oxidoreductase; Dimethylglycine Dehydrogenase; Glycerol-3-Phosphate Dehydrogenase; FAD Dependent Oxidoreductase/Aminomethyl Transferase

Number of amino acids: Translated: 389; Mature: 388

Protein sequence:

>389_residues
MSHIVIIGCGVVGATIAYQLSKIEGLKITVLDKQMPAQGSTGAALGVLMGVISQKAKGRPWKMRRMSVQAYHNLIPELEA
KINRSISHNRQGILQLCLPGEDLDKWQRLINIREADDLPLEMWDVERLGDRCPQLQISEVIAAIYSPEDLQVNPVELTLA
LVEAAQQNGVNFHFGVTVAEYKTISLPRNEYRCRQVSIKNLDETKKTPTLPDVDWLVVAAGLGSLPCLQGIKGGKLRSLQ
LKRKSNVDNRFTLIPVLGQALHLQVSTLLGKSDFQPVITGDDVHIIPVAENEYWVGATVEFPNDIGEVVADSSLLDHVMA
RAISFCPGLADANILRKWSGLRPRPEGQAAPAVGYLEGWRNILLATGHYRNGVLLAPATAEAVEKMIVK

Sequences:

>Translated_389_residues
MSHIVIIGCGVVGATIAYQLSKIEGLKITVLDKQMPAQGSTGAALGVLMGVISQKAKGRPWKMRRMSVQAYHNLIPELEA
KINRSISHNRQGILQLCLPGEDLDKWQRLINIREADDLPLEMWDVERLGDRCPQLQISEVIAAIYSPEDLQVNPVELTLA
LVEAAQQNGVNFHFGVTVAEYKTISLPRNEYRCRQVSIKNLDETKKTPTLPDVDWLVVAAGLGSLPCLQGIKGGKLRSLQ
LKRKSNVDNRFTLIPVLGQALHLQVSTLLGKSDFQPVITGDDVHIIPVAENEYWVGATVEFPNDIGEVVADSSLLDHVMA
RAISFCPGLADANILRKWSGLRPRPEGQAAPAVGYLEGWRNILLATGHYRNGVLLAPATAEAVEKMIVK
>Mature_388_residues
SHIVIIGCGVVGATIAYQLSKIEGLKITVLDKQMPAQGSTGAALGVLMGVISQKAKGRPWKMRRMSVQAYHNLIPELEAK
INRSISHNRQGILQLCLPGEDLDKWQRLINIREADDLPLEMWDVERLGDRCPQLQISEVIAAIYSPEDLQVNPVELTLAL
VEAAQQNGVNFHFGVTVAEYKTISLPRNEYRCRQVSIKNLDETKKTPTLPDVDWLVVAAGLGSLPCLQGIKGGKLRSLQL
KRKSNVDNRFTLIPVLGQALHLQVSTLLGKSDFQPVITGDDVHIIPVAENEYWVGATVEFPNDIGEVVADSSLLDHVMAR
AISFCPGLADANILRKWSGLRPRPEGQAAPAVGYLEGWRNILLATGHYRNGVLLAPATAEAVEKMIVK

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42691; Mature: 42560

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHIVIIGCGVVGATIAYQLSKIEGLKITVLDKQMPAQGSTGAALGVLMGVISQKAKGRP
CCEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC
WKMRRMSVQAYHNLIPELEAKINRSISHNRQGILQLCLPGEDLDKWQRLINIREADDLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCH
EMWDVERLGDRCPQLQISEVIAAIYSPEDLQVNPVELTLALVEAAQQNGVNFHFGVTVAE
HHCCHHHHHHHCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCEEEEEEEEEE
YKTISLPRNEYRCRQVSIKNLDETKKTPTLPDVDWLVVAAGLGSLPCLQGIKGGKLRSLQ
EEEECCCCCHHHHHHHHHCCCCHHCCCCCCCCCCHHHEECCCCCCHHHCCCCCCCEEEEE
LKRKSNVDNRFTLIPVLGQALHLQVSTLLGKSDFQPVITGDDVHIIPVAENEYWVGATVE
EHHHCCCCCEEEEHHHHCHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCEEEEEEEE
FPNDIGEVVADSSLLDHVMARAISFCPGLADANILRKWSGLRPRPEGQAAPAVGYLEGWR
CCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
NILLATGHYRNGVLLAPATAEAVEKMIVK
HEEEEECCCCCCEEECCCHHHHHHHHHCC
>Mature Secondary Structure 
SHIVIIGCGVVGATIAYQLSKIEGLKITVLDKQMPAQGSTGAALGVLMGVISQKAKGRP
CEEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCC
WKMRRMSVQAYHNLIPELEAKINRSISHNRQGILQLCLPGEDLDKWQRLINIREADDLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCH
EMWDVERLGDRCPQLQISEVIAAIYSPEDLQVNPVELTLALVEAAQQNGVNFHFGVTVAE
HHCCHHHHHHHCCCCHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHCCCEEEEEEEEEE
YKTISLPRNEYRCRQVSIKNLDETKKTPTLPDVDWLVVAAGLGSLPCLQGIKGGKLRSLQ
EEEECCCCCHHHHHHHHHCCCCHHCCCCCCCCCCHHHEECCCCCCHHHCCCCCCCEEEEE
LKRKSNVDNRFTLIPVLGQALHLQVSTLLGKSDFQPVITGDDVHIIPVAENEYWVGATVE
EHHHCCCCCEEEEHHHHCHHHHHHHHHHHCCCCCCCEEECCCEEEEEEECCCEEEEEEEE
FPNDIGEVVADSSLLDHVMARAISFCPGLADANILRKWSGLRPRPEGQAAPAVGYLEGWR
CCHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
NILLATGHYRNGVLLAPATAEAVEKMIVK
HEEEEECCCCCCEEECCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA