The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

Click here to switch to the map view.

The map label for this gene is 113474712

Identifier: 113474712

GI number: 113474712

Start: 1420322

End: 1420510

Strand: Reverse

Name: 113474712

Synonym: Tery_0899

Alternate gene names: NA

Gene position: 1420510-1420322 (Counterclockwise)

Preceding gene: 113474713

Following gene: 113474711

Centisome position: 18.33

GC content: 30.69

Gene sequence:

>189_bases
GTGGATATTAATTCAGAGACTGCTCTTATTGCTGCTGATATTCGGGTTAGATATAATTTAAAATTACCTGATGCTTTACA
AATTGCCACAGCAATTCAGTCTAATTGTGATGCTTTTTTAACTAATGATTTACAGTTCAAAAAAGTCCGTGAGTTATCTA
TTTTAGTAGTCAGTGAATTAACATTATGA

Upstream 100 bases:

>100_bases
TTATTTAGCAATCCTAATAATCCATATAACCAGTCAAAAAAATCTCTCTGTACAACAACAATTTATTAACATTCTGACGA
GTCAAGACAAAATTAATTTT

Downstream 100 bases:

>100_bases
CTCTATTTCTTGCTGCCAATTTTTAACTGAAGTTTATCTAACTAGCAATAAACATGAAAACTTTACCTATTGATTTACAA
AAAGCTGAAATTAATCAAAT

Product: PilT protein-like

Products: NA

Alternate protein names: PilT Protein-Like

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MDINSETALIAADIRVRYNLKLPDALQIATAIQSNCDAFLTNDLQFKKVRELSILVVSELTL

Sequences:

>Translated_62_residues
MDINSETALIAADIRVRYNLKLPDALQIATAIQSNCDAFLTNDLQFKKVRELSILVVSELTL
>Mature_62_residues
MDINSETALIAADIRVRYNLKLPDALQIATAIQSNCDAFLTNDLQFKKVRELSILVVSELTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6921; Mature: 6921

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINSETALIAADIRVRYNLKLPDALQIATAIQSNCDAFLTNDLQFKKVRELSILVVSEL
CCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHEEEEEEEEE
TL
CC
>Mature Secondary Structure
MDINSETALIAADIRVRYNLKLPDALQIATAIQSNCDAFLTNDLQFKKVRELSILVVSEL
CCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHEEEEEEEEE
TL
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA