| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474711
Identifier: 113474711
GI number: 113474711
Start: 1419957
End: 1420268
Strand: Reverse
Name: 113474711
Synonym: Tery_0898
Alternate gene names: NA
Gene position: 1420268-1419957 (Counterclockwise)
Preceding gene: 113474712
Following gene: 113474710
Centisome position: 18.33
GC content: 30.77
Gene sequence:
>312_bases ATGAAAACTTTACCTATTGATTTACAAAAAGCTGAAATTAATCAAATTTGTCAGCAGTATAATATTAGCAAATTATCCTT ATTTGGTTCAGTGCTGCGGCATGACTTTACGACTGAAAGTGATATAGATATCTTAGTAGAATTTGAGCCAGGAAAAACTC CTGGTTTAGCAATTATTAGAATAGAAGATGAATTAAATTATTTATTAGGAAGAGTAGTAGATTTGAGGACTCCAAAAGAT CTAAGTCGTTATTTTCGCCTTTTGCGGGTATTACAGGAAGCAATGGTAATTTATGAGCAAGTAATAATATAA
Upstream 100 bases:
>100_bases AAGTCCGTGAGTTATCTATTTTAGTAGTCAGTGAATTAACATTATGACTCTATTTCTTGCTGCCAATTTTTAACTGAAGT TTATCTAACTAGCAATAAAC
Downstream 100 bases:
>100_bases TTATTTTTGGGAATTTGCTTTTGAGAATCAAACCAATGCCTGAAGTTTCCAGATTTTATGGAATTATCAAAATTATTATT TTTTGCAGATCATCCTCCTC
Product: DNA polymerase beta-like subunit
Products: NA
Alternate protein names: DNA Polymerase Beta-Like Region; DNA Polymerase Beta Domain-Containing Protein Region; DNA Polymerase Subunit Beta; DNA Polymerase Beta Domain-Containing Protein; DNA Polymerase Beta Subunit; Nucleotidyltransferase
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MKTLPIDLQKAEINQICQQYNISKLSLFGSVLRHDFTTESDIDILVEFEPGKTPGLAIIRIEDELNYLLGRVVDLRTPKD LSRYFRLLRVLQEAMVIYEQVII
Sequences:
>Translated_103_residues MKTLPIDLQKAEINQICQQYNISKLSLFGSVLRHDFTTESDIDILVEFEPGKTPGLAIIRIEDELNYLLGRVVDLRTPKD LSRYFRLLRVLQEAMVIYEQVII >Mature_103_residues MKTLPIDLQKAEINQICQQYNISKLSLFGSVLRHDFTTESDIDILVEFEPGKTPGLAIIRIEDELNYLLGRVVDLRTPKD LSRYFRLLRVLQEAMVIYEQVII
Specific function: Unknown
COG id: COG1669
COG function: function code R; Predicted nucleotidyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11966; Mature: 11966
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLPIDLQKAEINQICQQYNISKLSLFGSVLRHDFTTESDIDILVEFEPGKTPGLAIIR CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEE IEDELNYLLGRVVDLRTPKDLSRYFRLLRVLQEAMVIYEQVII EHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKTLPIDLQKAEINQICQQYNISKLSLFGSVLRHDFTTESDIDILVEFEPGKTPGLAIIR CCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCEEEEE IEDELNYLLGRVVDLRTPKDLSRYFRLLRVLQEAMVIYEQVII EHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA