| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474713
Identifier: 113474713
GI number: 113474713
Start: 1420682
End: 1420915
Strand: Reverse
Name: 113474713
Synonym: Tery_0900
Alternate gene names: NA
Gene position: 1420915-1420682 (Counterclockwise)
Preceding gene: 113474716
Following gene: 113474712
Centisome position: 18.33
GC content: 32.05
Gene sequence:
>234_bases ATGAGTCCTTTATTAACAAAAATATTACAAGAAATTGAACAGCTTACTATAGAAGAAAAGTTTCAAATCATTACCTATAC TACAGAACAATTGAAGCGTCAGACAACTATTCCCAAAACCTCTAAACATAGTTTGTGTAATTTGCGAGGAATATTACCTA ATATCTTAGAGGGAAAAGATGCTCAAGAATGGGTTAAGGAATTACGTCAAGAATGGCAACAACGAGAACAATAA
Upstream 100 bases:
>100_bases TGAGGAATGTTGATAGAATAGATATACATATTAAGAATATGTCAATGCTTTTATATTTAATCAGCAAGCCCCAATTAGAC TATTTATGGAGGTTAAATTA
Downstream 100 bases:
>100_bases ATTGTTTAAATTCAAAGAAAATTGAGACAATTTTAGGACAGCTAAATCGGATTTTTTAGATTCTGCTCCGATTATTTAGC AATCCTAATAATCCATATAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MSPLLTKILQEIEQLTIEEKFQIITYTTEQLKRQTTIPKTSKHSLCNLRGILPNILEGKDAQEWVKELRQEWQQREQ
Sequences:
>Translated_77_residues MSPLLTKILQEIEQLTIEEKFQIITYTTEQLKRQTTIPKTSKHSLCNLRGILPNILEGKDAQEWVKELRQEWQQREQ >Mature_76_residues SPLLTKILQEIEQLTIEEKFQIITYTTEQLKRQTTIPKTSKHSLCNLRGILPNILEGKDAQEWVKELRQEWQQREQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9193; Mature: 9062
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLLTKILQEIEQLTIEEKFQIITYTTEQLKRQTTIPKTSKHSLCNLRGILPNILEGKD CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC AQEWVKELRQEWQQREQ HHHHHHHHHHHHHHHCC >Mature Secondary Structure SPLLTKILQEIEQLTIEEKFQIITYTTEQLKRQTTIPKTSKHSLCNLRGILPNILEGKD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC AQEWVKELRQEWQQREQ HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA