The gene/protein map for NC_008312 is currently unavailable.
Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474668

Identifier: 113474668

GI number: 113474668

Start: 1340262

End: 1340720

Strand: Reverse

Name: 113474668

Synonym: Tery_0846

Alternate gene names: NA

Gene position: 1340720-1340262 (Counterclockwise)

Preceding gene: 113474669

Following gene: 113474667

Centisome position: 17.3

GC content: 32.03

Gene sequence:

>459_bases
ATGGATCGAGAAAATTATTTACATAATTGGCAGCAAGAGTTTATTTCTACTAATTTAATCTCTATAGGATATAATGCTTG
GCAAGGTTATTTAAGTAGCCAAAGAGGTCTAATTATTTGCAGTACAAACTTACCTATTATTGGTGCAAGTGGAGAAACAT
TTAAAGTACATTTTGTGCCTCGTAATAATCTTGTACCTCTTCTCAATGCTTGGTTAAAAGCACCTGATACTGTCCCCCTT
AAAACACACTTTATGAATGCTCATATTTTAGAAGCTGTAGATAATTATAACCCTGAAAAAGATGTCGTTTTTATGTTGGA
ATCTGGCAGTTATGTTACTTTCTTTTATCTTACTAATTTACCGATTAGTCCGCCTAGTTGTTACCAACAAGTAGTCAAAA
TTTGGAATGAATTTCCATCTCAATATTCAGAGGAATATCAAAATAATCATCATCTCTAA

Upstream 100 bases:

>100_bases
GCGGGGGCTTAACTAGAACAAATAATGGCATATTCATATTTCTATTCAGCAACACCTAAATCTTTTCTAAGTAGTTTAAT
TATATAAGTTATCGAATCAA

Downstream 100 bases:

>100_bases
AATTTGCTAATTTATTATATCTTTAGATTAAATAAAAAAAGTTATAGTAAGTGTTTATCTGTCAGTACTTAAGCTATGAA
TTATTAGCTCATTTTCAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MDRENYLHNWQQEFISTNLISIGYNAWQGYLSSQRGLIICSTNLPIIGASGETFKVHFVPRNNLVPLLNAWLKAPDTVPL
KTHFMNAHILEAVDNYNPEKDVVFMLESGSYVTFFYLTNLPISPPSCYQQVVKIWNEFPSQYSEEYQNNHHL

Sequences:

>Translated_152_residues
MDRENYLHNWQQEFISTNLISIGYNAWQGYLSSQRGLIICSTNLPIIGASGETFKVHFVPRNNLVPLLNAWLKAPDTVPL
KTHFMNAHILEAVDNYNPEKDVVFMLESGSYVTFFYLTNLPISPPSCYQQVVKIWNEFPSQYSEEYQNNHHL
>Mature_152_residues
MDRENYLHNWQQEFISTNLISIGYNAWQGYLSSQRGLIICSTNLPIIGASGETFKVHFVPRNNLVPLLNAWLKAPDTVPL
KTHFMNAHILEAVDNYNPEKDVVFMLESGSYVTFFYLTNLPISPPSCYQQVVKIWNEFPSQYSEEYQNNHHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17613; Mature: 17613

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRENYLHNWQQEFISTNLISIGYNAWQGYLSSQRGLIICSTNLPIIGASGETFKVHFVP
CCCHHHHHHHHHHHHHHHHHEECHHHHHHHHCCCCCEEEEECCCCEEECCCCEEEEEEEE
RNNLVPLLNAWLKAPDTVPLKTHFMNAHILEAVDNYNPEKDVVFMLESGSYVTFFYLTNL
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECC
PISPPSCYQQVVKIWNEFPSQYSEEYQNNHHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDRENYLHNWQQEFISTNLISIGYNAWQGYLSSQRGLIICSTNLPIIGASGETFKVHFVP
CCCHHHHHHHHHHHHHHHHHEECHHHHHHHHCCCCCEEEEECCCCEEECCCCEEEEEEEE
RNNLVPLLNAWLKAPDTVPLKTHFMNAHILEAVDNYNPEKDVVFMLESGSYVTFFYLTNL
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEEEECC
PISPPSCYQQVVKIWNEFPSQYSEEYQNNHHL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA