| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474667
Identifier: 113474667
GI number: 113474667
Start: 1339201
End: 1339905
Strand: Reverse
Name: 113474667
Synonym: Tery_0845
Alternate gene names: NA
Gene position: 1339905-1339201 (Counterclockwise)
Preceding gene: 113474668
Following gene: 113474666
Centisome position: 17.29
GC content: 35.18
Gene sequence:
>705_bases ATGTTAACTAAAAATATAAAAATAACCACTCAAGAGTTTCTTCTTCAATTAGACAAAATTATTGAAGAAAAACATTTACT TAAACATCAATTCTATCAAATGTGGAATGAAGGAAAATTATCTTTAGAAATGTTGCAAGAGTACGCTCAAGAATATTATC TACAAGTTCATTATTTCCCTACTTATGTTAGTGCTACGCATGCAGCTTGTGACGACTTAGAAATCCGAAAAATGCTCCTA GAAAATCTCATAGAAGAAGAAATGGGAGCCACAAATCACCCAGAATTATGGTTGCGTTTTGCAGAAGGTTTGGGTGTAAA ACGGAAAGCTGTACAAGAGCGCCAACACCTAGCCAAAACTCAGGAATCAGTGAAGATTTTGCAACAGTTATCCCACAGTG AAAATACAGCAAAAGGTTTAGCTGCTCTCTATGCTTATGAATCCCAAATTCCCGAAGTAGCTACTACTAAAATTGCTGGT TTGAAAAAATTTTACGGCATTAATTCTGAAGCAGCTTTGGCATTTTTTAAAGTACATGAAAAGGCTGATGAAATTCACAG CAAAGTTACGCGAGAAGCATTAGTAAAACTCTGTGAAACTAATGCTCAAAAACAGGAAGCATTAACAGCAGCAGCAACAG CAGTAGATGCTTTAAACTTACTACTTGATGGGGTGTATGAAGAATATTGTCAAGTTGTGAATTAA
Upstream 100 bases:
>100_bases ATTCTTTATTAACAGTTAATTTTAATAAAATTTATTCGCCTCTTGACAATAAAAAAAAAGATGATACTATGTCTATATAT TATTTATTTGCCAAACAATT
Downstream 100 bases:
>100_bases TGACAGCAATTTTCCGTTAAGGAACGGAAATTAAATAAGACCGGGAAAATATGCTTTATGCCGCATAAACCTCTTGAGGG TAATTAATTTTATCCGGTTT
Product: TENA/THI-4 protein
Products: NA
Alternate protein names: Chlamydia protein associating with death domains; CADD [H]
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MLTKNIKITTQEFLLQLDKIIEEKHLLKHQFYQMWNEGKLSLEMLQEYAQEYYLQVHYFPTYVSATHAACDDLEIRKMLL ENLIEEEMGATNHPELWLRFAEGLGVKRKAVQERQHLAKTQESVKILQQLSHSENTAKGLAALYAYESQIPEVATTKIAG LKKFYGINSEAALAFFKVHEKADEIHSKVTREALVKLCETNAQKQEALTAAATAVDALNLLLDGVYEEYCQVVN
Sequences:
>Translated_234_residues MLTKNIKITTQEFLLQLDKIIEEKHLLKHQFYQMWNEGKLSLEMLQEYAQEYYLQVHYFPTYVSATHAACDDLEIRKMLL ENLIEEEMGATNHPELWLRFAEGLGVKRKAVQERQHLAKTQESVKILQQLSHSENTAKGLAALYAYESQIPEVATTKIAG LKKFYGINSEAALAFFKVHEKADEIHSKVTREALVKLCETNAQKQEALTAAATAVDALNLLLDGVYEEYCQVVN >Mature_234_residues MLTKNIKITTQEFLLQLDKIIEEKHLLKHQFYQMWNEGKLSLEMLQEYAQEYYLQVHYFPTYVSATHAACDDLEIRKMLL ENLIEEEMGATNHPELWLRFAEGLGVKRKAVQERQHLAKTQESVKILQQLSHSENTAKGLAALYAYESQIPEVATTKIAG LKKFYGINSEAALAFFKVHEKADEIHSKVTREALVKLCETNAQKQEALTAAATAVDALNLLLDGVYEEYCQVVN
Specific function: Chlamydia specific toxin inducing apoptosis in mammalian cell lines [H]
COG id: COG5424
COG function: function code H; Pyrroloquinoline quinone (Coenzyme PQQ) biosynthesis protein C
Gene ontology:
Cell location: Secreted. Note=Secreted into the host cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pqqC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016084 - InterPro: IPR004305 [H]
Pfam domain/function: PF03070 TENA_THI-4 [H]
EC number: NA
Molecular weight: Translated: 26763; Mature: 26763
Theoretical pI: Translated: 5.82; Mature: 5.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKNIKITTQEFLLQLDKIIEEKHLLKHQFYQMWNEGKLSLEMLQEYAQEYYLQVHYFP CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEHH TYVSATHAACDDLEIRKMLLENLIEEEMGATNHPELWLRFAEGLGVKRKAVQERQHLAKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH QESVKILQQLSHSENTAKGLAALYAYESQIPEVATTKIAGLKKFYGINSEAALAFFKVHE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KADEIHSKVTREALVKLCETNAQKQEALTAAATAVDALNLLLDGVYEEYCQVVN HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLTKNIKITTQEFLLQLDKIIEEKHLLKHQFYQMWNEGKLSLEMLQEYAQEYYLQVHYFP CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEHH TYVSATHAACDDLEIRKMLLENLIEEEMGATNHPELWLRFAEGLGVKRKAVQERQHLAKT HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH QESVKILQQLSHSENTAKGLAALYAYESQIPEVATTKIAGLKKFYGINSEAALAFFKVHE HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH KADEIHSKVTREALVKLCETNAQKQEALTAAATAVDALNLLLDGVYEEYCQVVN HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]