| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474648
Identifier: 113474648
GI number: 113474648
Start: 1302231
End: 1302578
Strand: Reverse
Name: 113474648
Synonym: Tery_0822
Alternate gene names: NA
Gene position: 1302578-1302231 (Counterclockwise)
Preceding gene: 113474649
Following gene: 113474647
Centisome position: 16.81
GC content: 33.05
Gene sequence:
>348_bases ATGAATTCAATAACTAAACCAACAGAAAAATCCTTTAATTTATTACCTACTTCTAATTTATCAAAAAGTTTACCAGACCA AACTCAATTCTCCGACAAGGATCAGGACTTTGTGAAAAATTTTCAAGAACCTCCACAAGGAGATTTATTAACTCATTCTA TTACTCCAATTTTGCAACAAATTTATCCCGATGATAAATACTGCGTCGGTCGAGATAGTGCCATTTATTGGCGCATCACT AAAGCAACAGAAACACCAGAAAAAAGTTCTGTTTATCCTGACTGTTTTTATGTACCGAATGTGCTACAAAAATTAGATGG TAAATTACGTCGTTCTTCTGTTTTATAG
Upstream 100 bases:
>100_bases TTTAAGTAATCTTTTAAAGAAACTACTATAATAATTTCAAAGGTAATATCAGGAAAATTATTCTATAAAACCTGCCTAAG TTTGTAACTTTAAAATTAAT
Downstream 100 bases:
>100_bases AAGGAATTAATCAACCCATTAATTGTATTAGAATTTTTTTCTGGAGACTGGTCAGAAGAGAGAGAAAAAACACCAAGGAA AAAGGTAATTTTTTGGTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MNSITKPTEKSFNLLPTSNLSKSLPDQTQFSDKDQDFVKNFQEPPQGDLLTHSITPILQQIYPDDKYCVGRDSAIYWRIT KATETPEKSSVYPDCFYVPNVLQKLDGKLRRSSVL
Sequences:
>Translated_115_residues MNSITKPTEKSFNLLPTSNLSKSLPDQTQFSDKDQDFVKNFQEPPQGDLLTHSITPILQQIYPDDKYCVGRDSAIYWRIT KATETPEKSSVYPDCFYVPNVLQKLDGKLRRSSVL >Mature_115_residues MNSITKPTEKSFNLLPTSNLSKSLPDQTQFSDKDQDFVKNFQEPPQGDLLTHSITPILQQIYPDDKYCVGRDSAIYWRIT KATETPEKSSVYPDCFYVPNVLQKLDGKLRRSSVL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13158; Mature: 13158
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSITKPTEKSFNLLPTSNLSKSLPDQTQFSDKDQDFVKNFQEPPQGDLLTHSITPILQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH IYPDDKYCVGRDSAIYWRITKATETPEKSSVYPDCFYVPNVLQKLDGKLRRSSVL HCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNSITKPTEKSFNLLPTSNLSKSLPDQTQFSDKDQDFVKNFQEPPQGDLLTHSITPILQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHH IYPDDKYCVGRDSAIYWRITKATETPEKSSVYPDCFYVPNVLQKLDGKLRRSSVL HCCCCCEECCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA