| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
Click here to switch to the map view.
The map label for this gene is 113474649
Identifier: 113474649
GI number: 113474649
Start: 1303103
End: 1305283
Strand: Reverse
Name: 113474649
Synonym: Tery_0823
Alternate gene names: NA
Gene position: 1305283-1303103 (Counterclockwise)
Preceding gene: 113474650
Following gene: 113474648
Centisome position: 16.84
GC content: 31.27
Gene sequence:
>2181_bases ATGAAAAATATTGAAATTCACGAGTTTAGCACAGGCATAATTCCCGAAATATTACCCAACGGTCAATGGATTTCCCGGGG ATTTAAAGTAGGAGAATATATGAATTTAACCTTGCCAAAAATTCCCTATTCTCTAGCAAGAGCAATTGCCAATAAAGGAT TTGAAGTCGGCAAAGATCGCCATAGTCAAGAACCTACTTTTGTTGGGCGAGTTGTGTTAAGTATGAACGATAAAGAACCA GATTATTCAGTAGTTGCGGTAGTGACATCTGGGCAAGATGAATATAGTCGTTCTACTTCTTTTTATCGTTATTTTTTATG TACTGGAAAAGATAATATTTGGCAAATATTAGATTGGATAAATATTCAGCAGCAACAGGGAATTAATCCAATATTTAATC CATCTGAAACTAAACAGATTGGAAAACCAAACAAACATCAAGTCACAAAAAAACCAGAAATAAATTTACCTAAAAATTGG CAAAATTGGCTGAACACTACAACTTTCCCAGTCATAATTTCTACTAAATTATCTGACTTACAAATTCTGAATAAAATGGC TGAATTAAAAGCCAATGATCTCCCCATATCATGGATTTATAATCTTGAAGCTGTTGAGCGACCAGAACAATTTATAATTA TTCATCCAGCCAATGCAGAAGTAGCAGCAAACCTGACAAAAATACAGACAAAAATGATTAAAAATTCTTCTAGTAATACC TCAAGATATATAGATGAAGCTGCTATAGAAACAGCAATTAAAGGATTAATTAGTGGCTCTAAAATCAAGCAAGAATGGAT AGAAAATTTAGTTTTAAAATTACAGAATGGTCAAATTACATCAGAATATTTAAACAATTTATTTGATAACCTGGGAGCGA CTAATGGGATAAAACAAGGAAATGCTAATGCTCAGATGATTAGGTTATTAACTTTAAGGGCAATTTTTATTCCTGAGAGT TTACCAGAATATCTAAATTGGTTAAATATTAGTAGGCATAGAAAGAAAGAAAATGAAAAGCAAAAAATTTCCAGACAATT ACAATTACAACTGAGAAATTATAAAAAATTATTAGAACCATTAATCATCTTAGGAGCAAATCATGTCTTATCTCAAATCT TAGGAAAAAAAATATCTGTTACTGACTACTGTTGTCTTTTAAAAAATCAAGACAGTTTATGGTCAGCACATTCGAGCATA ATTAAACAACAAGTTCGCCAGGATTTAAAATCTTTAGAAAATAGTCTATTACACAAAAATCCTGGTCAACAAAAAGATGA ATTAGTGTATGGAAATGCTACTTGGAAAAAGTTAATTGATTTTCTAAAAAATCGTTGGGATAAAACTTCCTCCTCCTATC AGAAAACCTCTCAGAAAACCTCCAATTATTATCAACCTTTTGCCGATTTATTTTATCAACTATCTGATTATGAGTTAGCA GCTTATTTTCACCAAATTAGCAATGGAAAAGTACCAAAAGAAATTTTTACCGCCGCGTTTCCGAAACTCAAATATTTTTA TCAAACAATTATTTTTGGGTTAACTGTTGAAAGGGAATTAGATTTTTCTGACCATATTACTATATTAATTAGAAAATATA GACGGTCAGTAGCAGCAACTTTTCTGATTATGTTTTCTCATGGTTTGTTTTTTATTTTAGGATATCAGGTAGGTAAGCTT AATAGTGGAAATATTGTTGAAAGGAAAACTCAAGAATATCCCCTTTCCTCAGAAGAAATATTAACTGATGTAGAAAAAAA TACTGTGAGTGAACTTTCGACGGAAAAAATGGAAAAAGCACTAGAAAAGTTTTCCACTACGAGGAGAGAAATTCAAAAAA TTGTTCGGGAGTTAGAGGTAGAATTATTAAATCAAAATTCGACGTTATTGACAACAGAAGATGCGCGTTTAGAAATTATT AAAGCTATTCATGAGATTCTAGAAAATGATGTAAAAATTCAGTATATCGCAGGCTATAAAGATGATGTTATCGGGGAAGA AGATAAATATTTAGTGGTGAAAAAGCAGTGGATAGGAGCAATTTATTCCTATCAAAAAAAATTTTTTAGTGATGGTTTTG GCTACATAGAACCGAATAAGAAAACGGCAGATAAATTAAAGTGCGATCTTGCAGACTTGTTAGAAATTAATTTACAAACA CGACCTCAACGTTGTGGATAA
Upstream 100 bases:
>100_bases AATCTTTGCTTCAATATTTTAGTGGAATAGTTTTGCAAAACCCCTACAAATTATTTTTATTTATCAGTATTGAAGTATTG AAGTGAATTAGTATTAGGAA
Downstream 100 bases:
>100_bases AAATTATCTATAGTTATAGAAGTTAGCTATTAGCAGTCAGTCTTCATTTAAGTTACCAGTCGTCAGCTTTTTTTGATGCT ATTCAATTTCTATAAATTTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MKNIEIHEFSTGIIPEILPNGQWISRGFKVGEYMNLTLPKIPYSLARAIANKGFEVGKDRHSQEPTFVGRVVLSMNDKEP DYSVVAVVTSGQDEYSRSTSFYRYFLCTGKDNIWQILDWINIQQQQGINPIFNPSETKQIGKPNKHQVTKKPEINLPKNW QNWLNTTTFPVIISTKLSDLQILNKMAELKANDLPISWIYNLEAVERPEQFIIIHPANAEVAANLTKIQTKMIKNSSSNT SRYIDEAAIETAIKGLISGSKIKQEWIENLVLKLQNGQITSEYLNNLFDNLGATNGIKQGNANAQMIRLLTLRAIFIPES LPEYLNWLNISRHRKKENEKQKISRQLQLQLRNYKKLLEPLIILGANHVLSQILGKKISVTDYCCLLKNQDSLWSAHSSI IKQQVRQDLKSLENSLLHKNPGQQKDELVYGNATWKKLIDFLKNRWDKTSSSYQKTSQKTSNYYQPFADLFYQLSDYELA AYFHQISNGKVPKEIFTAAFPKLKYFYQTIIFGLTVERELDFSDHITILIRKYRRSVAATFLIMFSHGLFFILGYQVGKL NSGNIVERKTQEYPLSSEEILTDVEKNTVSELSTEKMEKALEKFSTTRREIQKIVRELEVELLNQNSTLLTTEDARLEII KAIHEILENDVKIQYIAGYKDDVIGEEDKYLVVKKQWIGAIYSYQKKFFSDGFGYIEPNKKTADKLKCDLADLLEINLQT RPQRCG
Sequences:
>Translated_726_residues MKNIEIHEFSTGIIPEILPNGQWISRGFKVGEYMNLTLPKIPYSLARAIANKGFEVGKDRHSQEPTFVGRVVLSMNDKEP DYSVVAVVTSGQDEYSRSTSFYRYFLCTGKDNIWQILDWINIQQQQGINPIFNPSETKQIGKPNKHQVTKKPEINLPKNW QNWLNTTTFPVIISTKLSDLQILNKMAELKANDLPISWIYNLEAVERPEQFIIIHPANAEVAANLTKIQTKMIKNSSSNT SRYIDEAAIETAIKGLISGSKIKQEWIENLVLKLQNGQITSEYLNNLFDNLGATNGIKQGNANAQMIRLLTLRAIFIPES LPEYLNWLNISRHRKKENEKQKISRQLQLQLRNYKKLLEPLIILGANHVLSQILGKKISVTDYCCLLKNQDSLWSAHSSI IKQQVRQDLKSLENSLLHKNPGQQKDELVYGNATWKKLIDFLKNRWDKTSSSYQKTSQKTSNYYQPFADLFYQLSDYELA AYFHQISNGKVPKEIFTAAFPKLKYFYQTIIFGLTVERELDFSDHITILIRKYRRSVAATFLIMFSHGLFFILGYQVGKL NSGNIVERKTQEYPLSSEEILTDVEKNTVSELSTEKMEKALEKFSTTRREIQKIVRELEVELLNQNSTLLTTEDARLEII KAIHEILENDVKIQYIAGYKDDVIGEEDKYLVVKKQWIGAIYSYQKKFFSDGFGYIEPNKKTADKLKCDLADLLEINLQT RPQRCG >Mature_726_residues MKNIEIHEFSTGIIPEILPNGQWISRGFKVGEYMNLTLPKIPYSLARAIANKGFEVGKDRHSQEPTFVGRVVLSMNDKEP DYSVVAVVTSGQDEYSRSTSFYRYFLCTGKDNIWQILDWINIQQQQGINPIFNPSETKQIGKPNKHQVTKKPEINLPKNW QNWLNTTTFPVIISTKLSDLQILNKMAELKANDLPISWIYNLEAVERPEQFIIIHPANAEVAANLTKIQTKMIKNSSSNT SRYIDEAAIETAIKGLISGSKIKQEWIENLVLKLQNGQITSEYLNNLFDNLGATNGIKQGNANAQMIRLLTLRAIFIPES LPEYLNWLNISRHRKKENEKQKISRQLQLQLRNYKKLLEPLIILGANHVLSQILGKKISVTDYCCLLKNQDSLWSAHSSI IKQQVRQDLKSLENSLLHKNPGQQKDELVYGNATWKKLIDFLKNRWDKTSSSYQKTSQKTSNYYQPFADLFYQLSDYELA AYFHQISNGKVPKEIFTAAFPKLKYFYQTIIFGLTVERELDFSDHITILIRKYRRSVAATFLIMFSHGLFFILGYQVGKL NSGNIVERKTQEYPLSSEEILTDVEKNTVSELSTEKMEKALEKFSTTRREIQKIVRELEVELLNQNSTLLTTEDARLEII KAIHEILENDVKIQYIAGYKDDVIGEEDKYLVVKKQWIGAIYSYQKKFFSDGFGYIEPNKKTADKLKCDLADLLEINLQT RPQRCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83687; Mature: 83687
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNIEIHEFSTGIIPEILPNGQWISRGFKVGEYMNLTLPKIPYSLARAIANKGFEVGKDR CCCCEEECCCCCCCHHHCCCCHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCC HSQEPTFVGRVVLSMNDKEPDYSVVAVVTSGQDEYSRSTSFYRYFLCTGKDNIWQILDWI CCCCCCEEEEEEEEECCCCCCCEEEEEEECCCHHHHHCCCEEEEEEEECCCHHHHHHHHH NIQQQQGINPIFNPSETKQIGKPNKHQVTKKPEINLPKNWQNWLNTTTFPVIISTKLSDL HHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCHHHH QILNKMAELKANDLPISWIYNLEAVERPEQFIIIHPANAEVAANLTKIQTKMIKNSSSNT HHHHHHHHCCCCCCCEEEEECCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCH SRYIDEAAIETAIKGLISGSKIKQEWIENLVLKLQNGQITSEYLNNLFDNLGATNGIKQG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC NANAQMIRLLTLRAIFIPESLPEYLNWLNISRHRKKENEKQKISRQLQLQLRNYKKLLEP CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIILGANHVLSQILGKKISVTDYCCLLKNQDSLWSAHSSIIKQQVRQDLKSLENSLLHKN HHHHCCHHHHHHHHCCCCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGQQKDELVYGNATWKKLIDFLKNRWDKTSSSYQKTSQKTSNYYQPFADLFYQLSDYELA CCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH AYFHQISNGKVPKEIFTAAFPKLKYFYQTIIFGLTVERELDFSDHITILIRKYRRSVAAT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHH FLIMFSHGLFFILGYQVGKLNSGNIVERKTQEYPLSSEEILTDVEKNTVSELSTEKMEKA HHHHHHCCHHEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LEKFSTTRREIQKIVRELEVELLNQNSTLLTTEDARLEIIKAIHEILENDVKIQYIAGYK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCC DDVIGEEDKYLVVKKQWIGAIYSYQKKFFSDGFGYIEPNKKTADKLKCDLADLLEINLQT CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHCHHHHHHCCCCC RPQRCG CCCCCC >Mature Secondary Structure MKNIEIHEFSTGIIPEILPNGQWISRGFKVGEYMNLTLPKIPYSLARAIANKGFEVGKDR CCCCEEECCCCCCCHHHCCCCHHHHCCCCCCCEEECCCCCCCHHHHHHHHHCCCCCCCCC HSQEPTFVGRVVLSMNDKEPDYSVVAVVTSGQDEYSRSTSFYRYFLCTGKDNIWQILDWI CCCCCCEEEEEEEEECCCCCCCEEEEEEECCCHHHHHCCCEEEEEEEECCCHHHHHHHHH NIQQQQGINPIFNPSETKQIGKPNKHQVTKKPEINLPKNWQNWLNTTTFPVIISTKLSDL HHHHHCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHCCCCCEEEEEECCHHHH QILNKMAELKANDLPISWIYNLEAVERPEQFIIIHPANAEVAANLTKIQTKMIKNSSSNT HHHHHHHHCCCCCCCEEEEECCHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCH SRYIDEAAIETAIKGLISGSKIKQEWIENLVLKLQNGQITSEYLNNLFDNLGATNGIKQG HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCC NANAQMIRLLTLRAIFIPESLPEYLNWLNISRHRKKENEKQKISRQLQLQLRNYKKLLEP CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIILGANHVLSQILGKKISVTDYCCLLKNQDSLWSAHSSIIKQQVRQDLKSLENSLLHKN HHHHCCHHHHHHHHCCCCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC PGQQKDELVYGNATWKKLIDFLKNRWDKTSSSYQKTSQKTSNYYQPFADLFYQLSDYELA CCCCCCCEEECCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCHHHH AYFHQISNGKVPKEIFTAAFPKLKYFYQTIIFGLTVERELDFSDHITILIRKYRRSVAAT HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHH FLIMFSHGLFFILGYQVGKLNSGNIVERKTQEYPLSSEEILTDVEKNTVSELSTEKMEKA HHHHHHCCHHEEEEHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LEKFSTTRREIQKIVRELEVELLNQNSTLLTTEDARLEIIKAIHEILENDVKIQYIAGYK HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHHHHHHHHHHHHCCCCEEEEEECCC DDVIGEEDKYLVVKKQWIGAIYSYQKKFFSDGFGYIEPNKKTADKLKCDLADLLEINLQT CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHCHHHHHHCCCCC RPQRCG CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA