Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474647

Identifier: 113474647

GI number: 113474647

Start: 1299865

End: 1300983

Strand: Reverse

Name: 113474647

Synonym: Tery_0820

Alternate gene names: NA

Gene position: 1300983-1299865 (Counterclockwise)

Preceding gene: 113474648

Following gene: 113474646

Centisome position: 16.79

GC content: 34.58

Gene sequence:

>1119_bases
ATGAGAATATACCTATATATTCTGTCAGGCATTACATCCGCATTAATAGGTTGGAGCATAGGGCAATTTATCCTCAGTGA
TCTAGGCTGGTTCAAAAAAATTCCCGAACTAGCATTATTTCCTTGTATTGCAATTTCCCTAGCAGTTGGCATAGTAGCTA
CGGATATATTTTTAAGTAATCCCACTCGGTTTAAACGGAACTTCAGCAGAGGTATAATACCCCTAAGTATTGCTGGAGGA
TTAGGATTTTTAATTGGTATTACTTCTGGAGCATTAGTACAAATATTACTTAATCCACAATTACGAGATAAAGTCATAAC
TATACCCGATGAATTTGTCAGAATAGTTGGCTGGATATTAATTGGAGGAGCAGTGGGTTTAGCCGAAGGTTTGACTTGGC
GATGGCGCAGTATAGAAGCAGGAGATAAAAGGCGTTTTTGGCAACGACTTACTATTAGCTTGGGCACCAGTATTTTAACT
GCTTTATTAGCAGCTATTATCTTTGAATGGATACGACATAAAATGGGAGGAATGCCTATAGCTTTAAAAGCTTGGGAAGA
CACAATAGGGTTTTCTTTGTTGGGTGGTTTGTTAGGTTTAGTATTGAGCTTTTCTACTTCTCCAAGTCATCTAGTTGCCC
TCAGAGCTGGAGCAGGTTTTGAATATATTGAAAATCTCGATATTAGTCAGTATCAAACACCTAATAATTATCCTCATATT
CAAAAAGAATTATTACCTAGATTGAAATTTGTGAGTAATGACTTAACCGATAAAATTGAAGAAGGATTATCTATTCAATT
ACCTCCTAGAGGTAAAGTTAAAATAGGTTCAGCTCAACTTAAAATTTTCGGTAATCAACAATTTGGGGTAAATATTTGTA
TTCCCGGTTTACCATTACATATTGCTGATTTAGATCTAGAACCTAGCCAAACAATTCTAGTGCCTAATCTGAAATTTTTT
AATAGAATAGAATATCAAGGCGATCGCTTAACTGAAAGTACACCAATTAAACTTAAACATAATGATTTAATTACATTTCA
TGCTGAAAATGGTATCTATAACAATCAAAAATTATTCAGATTTGTTTACTATAATCGCTTTTTGGATCCCCAAGGTTAG

Upstream 100 bases:

>100_bases
ATGATTTCTTCTTGATTGTTTATTCCTTTAATCATCCACGGATCAGTGTTAAAAATACTAGTTAAGTCAACTCTATAAAA
ATCAAAATTAATCTGAAATT

Downstream 100 bases:

>100_bases
TCTATATTTATTAATTTATAAAAAAGTAAAGGAAGTAAAATCTCTATAACGGGTAGTTAGGAATACATTACAAAAGCTCA
AAGAAATTAAAGAAGAGTAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MRIYLYILSGITSALIGWSIGQFILSDLGWFKKIPELALFPCIAISLAVGIVATDIFLSNPTRFKRNFSRGIIPLSIAGG
LGFLIGITSGALVQILLNPQLRDKVITIPDEFVRIVGWILIGGAVGLAEGLTWRWRSIEAGDKRRFWQRLTISLGTSILT
ALLAAIIFEWIRHKMGGMPIALKAWEDTIGFSLLGGLLGLVLSFSTSPSHLVALRAGAGFEYIENLDISQYQTPNNYPHI
QKELLPRLKFVSNDLTDKIEEGLSIQLPPRGKVKIGSAQLKIFGNQQFGVNICIPGLPLHIADLDLEPSQTILVPNLKFF
NRIEYQGDRLTESTPIKLKHNDLITFHAENGIYNNQKLFRFVYYNRFLDPQG

Sequences:

>Translated_372_residues
MRIYLYILSGITSALIGWSIGQFILSDLGWFKKIPELALFPCIAISLAVGIVATDIFLSNPTRFKRNFSRGIIPLSIAGG
LGFLIGITSGALVQILLNPQLRDKVITIPDEFVRIVGWILIGGAVGLAEGLTWRWRSIEAGDKRRFWQRLTISLGTSILT
ALLAAIIFEWIRHKMGGMPIALKAWEDTIGFSLLGGLLGLVLSFSTSPSHLVALRAGAGFEYIENLDISQYQTPNNYPHI
QKELLPRLKFVSNDLTDKIEEGLSIQLPPRGKVKIGSAQLKIFGNQQFGVNICIPGLPLHIADLDLEPSQTILVPNLKFF
NRIEYQGDRLTESTPIKLKHNDLITFHAENGIYNNQKLFRFVYYNRFLDPQG
>Mature_372_residues
MRIYLYILSGITSALIGWSIGQFILSDLGWFKKIPELALFPCIAISLAVGIVATDIFLSNPTRFKRNFSRGIIPLSIAGG
LGFLIGITSGALVQILLNPQLRDKVITIPDEFVRIVGWILIGGAVGLAEGLTWRWRSIEAGDKRRFWQRLTISLGTSILT
ALLAAIIFEWIRHKMGGMPIALKAWEDTIGFSLLGGLLGLVLSFSTSPSHLVALRAGAGFEYIENLDISQYQTPNNYPHI
QKELLPRLKFVSNDLTDKIEEGLSIQLPPRGKVKIGSAQLKIFGNQQFGVNICIPGLPLHIADLDLEPSQTILVPNLKFF
NRIEYQGDRLTESTPIKLKHNDLITFHAENGIYNNQKLFRFVYYNRFLDPQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41500; Mature: 41500

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIYLYILSGITSALIGWSIGQFILSDLGWFKKIPELALFPCIAISLAVGIVATDIFLSN
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
PTRFKRNFSRGIIPLSIAGGLGFLIGITSGALVQILLNPQLRDKVITIPDEFVRIVGWIL
CHHHHHHHCCCEEEEEECCCCEEEHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHH
IGGAVGLAEGLTWRWRSIEAGDKRRFWQRLTISLGTSILTALLAAIIFEWIRHKMGGMPI
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ALKAWEDTIGFSLLGGLLGLVLSFSTSPSHLVALRAGAGFEYIENLDISQYQTPNNYPHI
EEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCHH
QKELLPRLKFVSNDLTDKIEEGLSIQLPPRGKVKIGSAQLKIFGNQQFGVNICIPGLPLH
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCEEEEEEECCCCCEEEEECCCCEE
IADLDLEPSQTILVPNLKFFNRIEYQGDRLTESTPIKLKHNDLITFHAENGIYNNQKLFR
EEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHH
FVYYNRFLDPQG
HHHHHHHCCCCC
>Mature Secondary Structure
MRIYLYILSGITSALIGWSIGQFILSDLGWFKKIPELALFPCIAISLAVGIVATDIFLSN
CEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCC
PTRFKRNFSRGIIPLSIAGGLGFLIGITSGALVQILLNPQLRDKVITIPDEFVRIVGWIL
CHHHHHHHCCCEEEEEECCCCEEEHHCCCCCEEEEEECCCCCCCEEECCHHHHHHHHHHH
IGGAVGLAEGLTWRWRSIEAGDKRRFWQRLTISLGTSILTALLAAIIFEWIRHKMGGMPI
HHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
ALKAWEDTIGFSLLGGLLGLVLSFSTSPSHLVALRAGAGFEYIENLDISQYQTPNNYPHI
EEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCHH
QKELLPRLKFVSNDLTDKIEEGLSIQLPPRGKVKIGSAQLKIFGNQQFGVNICIPGLPLH
HHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEECCEEEEEEECCCCCEEEEECCCCEE
IADLDLEPSQTILVPNLKFFNRIEYQGDRLTESTPIKLKHNDLITFHAENGIYNNQKLFR
EEECCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCEEEECCCEEEEEECCCCCCCHHHHH
FVYYNRFLDPQG
HHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA