| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is pilG [H]
Identifier: 113474563
GI number: 113474563
Start: 1163597
End: 1164763
Strand: Reverse
Name: pilG [H]
Synonym: Tery_0718
Alternate gene names: 113474563
Gene position: 1164763-1163597 (Counterclockwise)
Preceding gene: 113474565
Following gene: 113474562
Centisome position: 15.03
GC content: 33.08
Gene sequence:
>1167_bases ATGTCTGCTAACAAACAGTTAATCAAATTGGCCAAAATTTTGGATGAACTTAGCCAACTAAATGCAACTGGCAAATTATT ATTAAATAGTCTGCCAAAAGAAAGACAAATCAACCTATCTTATGGTAGGATATTATATAGCACTAGCGAAATCCACAGAG TAAGGCGTTGGGAACGACGGGTAAAGTTATACTGCCCTAAGTGGAATCCTATAACCTCACAAATACAATTACAACTAGAG CCATACAAACCTTGGGAATACTTACTCCTGTATGATGGAATTAGCAAAAATCAAATCACTGTTGCTCAAGCAAAAGCAGT CATTCGCACTGTTACCCTAGAAATCTTGTTTTCCATAAGCTACTACCCAGATCTAATACATAAGTGGGAAGAAAACCCTG GTAGTAAATCAGAATTATCCCTTGGTTTATCTCTATCTTATTCGGAAATAAAACCAATTTTCGCTAAAGTTGCTCAAATA CAATATCTATCTAGAAAAGCAGGTTTTGAAAATTTAAACCTAAACCTTGTTCCTGTTCCTAAAAAACCTGTTGCCTCAGA AGCTTTATCTGGTTTCGGTAAATATTTACAGGGTGATTTAACTCTGTGGGATATTGTATGTAAACTACAAAAATCAATCT TAGTTGTCACTCATACTTTACTTCCCTTAGTCAAGAAAGGGTTGGTACAATTACAAACAATTTCAGATTTGCCAGGACCC AATTTTACATCATCTTTAGCAAAAACTAATTCTCATAAAAATAGAGATAAGACTATACCAAAAAAAAAGCCATTAATTGC TTGTATTGATGATAGTAAGGTAGTTGCTGAAACATTAAGAAAAATTGTTGAGCCTGCTGGATATAACCTGATCGGTATAC AAGATCCAATCAAAGGATTTGTGAAAATTGCTGAACATAAACCAGATTTGATTTTTCTTGACTTAGAAATGCCTAATGCT AATGGTTATAATGTTTATCAATTTTTACACAATACACCAGCTTTTAAAAAAATACCAGTTATCATTCTTACTAGTAAGAA TAATTTAATAGATCGCAGTCGGGCCAAGTTAATTGGAACTGCTGATTTTCTGAATAAGCCTCCTAAGCCAGAAGCAATTT TAAAAATTATTAAAAAACATTTGTCTGTAACTCCAAAATTTAACTGA
Upstream 100 bases:
>100_bases TTCCGTATGCTACTAGAGATATCCAGATGCTTAAGGCTTTGTGAACGACAGATCAGATTGCACTGCCCTGAGTTTAATCC TACAACCTGACAACTAAAAA
Downstream 100 bases:
>100_bases TCAAGAATAACTCTATTGTTACTTAGACTTATGTTATTAAAAGATATTAATAAATTTAACTACTCCGTTTCAGGTTTTTG GGTAGTCTTTGGACCATCTT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 387
Protein sequence:
>388_residues MSANKQLIKLAKILDELSQLNATGKLLLNSLPKERQINLSYGRILYSTSEIHRVRRWERRVKLYCPKWNPITSQIQLQLE PYKPWEYLLLYDGISKNQITVAQAKAVIRTVTLEILFSISYYPDLIHKWEENPGSKSELSLGLSLSYSEIKPIFAKVAQI QYLSRKAGFENLNLNLVPVPKKPVASEALSGFGKYLQGDLTLWDIVCKLQKSILVVTHTLLPLVKKGLVQLQTISDLPGP NFTSSLAKTNSHKNRDKTIPKKKPLIACIDDSKVVAETLRKIVEPAGYNLIGIQDPIKGFVKIAEHKPDLIFLDLEMPNA NGYNVYQFLHNTPAFKKIPVIILTSKNNLIDRSRAKLIGTADFLNKPPKPEAILKIIKKHLSVTPKFN
Sequences:
>Translated_388_residues MSANKQLIKLAKILDELSQLNATGKLLLNSLPKERQINLSYGRILYSTSEIHRVRRWERRVKLYCPKWNPITSQIQLQLE PYKPWEYLLLYDGISKNQITVAQAKAVIRTVTLEILFSISYYPDLIHKWEENPGSKSELSLGLSLSYSEIKPIFAKVAQI QYLSRKAGFENLNLNLVPVPKKPVASEALSGFGKYLQGDLTLWDIVCKLQKSILVVTHTLLPLVKKGLVQLQTISDLPGP NFTSSLAKTNSHKNRDKTIPKKKPLIACIDDSKVVAETLRKIVEPAGYNLIGIQDPIKGFVKIAEHKPDLIFLDLEMPNA NGYNVYQFLHNTPAFKKIPVIILTSKNNLIDRSRAKLIGTADFLNKPPKPEAILKIIKKHLSVTPKFN >Mature_387_residues SANKQLIKLAKILDELSQLNATGKLLLNSLPKERQINLSYGRILYSTSEIHRVRRWERRVKLYCPKWNPITSQIQLQLEP YKPWEYLLLYDGISKNQITVAQAKAVIRTVTLEILFSISYYPDLIHKWEENPGSKSELSLGLSLSYSEIKPIFAKVAQIQ YLSRKAGFENLNLNLVPVPKKPVASEALSGFGKYLQGDLTLWDIVCKLQKSILVVTHTLLPLVKKGLVQLQTISDLPGPN FTSSLAKTNSHKNRDKTIPKKKPLIACIDDSKVVAETLRKIVEPAGYNLIGIQDPIKGFVKIAEHKPDLIFLDLEMPNAN GYNVYQFLHNTPAFKKIPVIILTSKNNLIDRSRAKLIGTADFLNKPPKPEAILKIIKKHLSVTPKFN
Specific function: Is involved in pilus biosynthesis and twitching motility. May act as a single-domain response regulator whose function may be to receive a certain environmental signal(s) and then transduce that signal to the pilus assembly machinery via specific protein-
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011006 - InterPro: IPR001789 [H]
Pfam domain/function: PF00072 Response_reg [H]
EC number: NA
Molecular weight: Translated: 43877; Mature: 43746
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSANKQLIKLAKILDELSQLNATGKLLLNSLPKERQINLSYGRILYSTSEIHRVRRWERR CCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCEEEECHHHHHHHHHHHHC VKLYCPKWNPITSQIQLQLEPYKPWEYLLLYDGISKNQITVAQAKAVIRTVTLEILFSIS EEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHH YYPDLIHKWEENPGSKSELSLGLSLSYSEIKPIFAKVAQIQYLSRKAGFENLNLNLVPVP HHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC KKPVASEALSGFGKYLQGDLTLWDIVCKLQKSILVVTHTLLPLVKKGLVQLQTISDLPGP CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCC NFTSSLAKTNSHKNRDKTIPKKKPLIACIDDSKVVAETLRKIVEPAGYNLIGIQDPIKGF CCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCHHHHHH VKIAEHKPDLIFLDLEMPNANGYNVYQFLHNTPAFKKIPVIILTSKNNLIDRSRAKLIGT HHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHEEEE ADFLNKPPKPEAILKIIKKHLSVTPKFN HHHHCCCCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SANKQLIKLAKILDELSQLNATGKLLLNSLPKERQINLSYGRILYSTSEIHRVRRWERR CCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCEEECCCCEEEECHHHHHHHHHHHHC VKLYCPKWNPITSQIQLQLEPYKPWEYLLLYDGISKNQITVAQAKAVIRTVTLEILFSIS EEEECCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHH YYPDLIHKWEENPGSKSELSLGLSLSYSEIKPIFAKVAQIQYLSRKAGFENLNLNLVPVP HHHHHHHHHCCCCCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC KKPVASEALSGFGKYLQGDLTLWDIVCKLQKSILVVTHTLLPLVKKGLVQLQTISDLPGP CCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHCCCCC NFTSSLAKTNSHKNRDKTIPKKKPLIACIDDSKVVAETLRKIVEPAGYNLIGIQDPIKGF CCHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECCHHHHHH VKIAEHKPDLIFLDLEMPNANGYNVYQFLHNTPAFKKIPVIILTSKNNLIDRSRAKLIGT HHHHCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHEEEE ADFLNKPPKPEAILKIIKKHLSVTPKFN HHHHCCCCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8104179; 10984043 [H]