Click here to switch to the map view.

The map label for this gene is pilH [H]

Identifier: 113474562

GI number: 113474562

Start: 1162704

End: 1163051

Strand: Reverse

Name: pilH [H]

Synonym: Tery_0717

Alternate gene names: 113474562

Gene position: 1163051-1162704 (Counterclockwise)

Preceding gene: 113474563

Following gene: 113474561

Centisome position: 15.01

GC content: 35.63

Gene sequence:

>348_bases
ATGGTAGAAGATAGTCACAGAGAAGCTACTGCTCTGACTCAGTGCTTGAAAAAATCAGGGTATGAGGTCTTAAATGTAGG
TACAGCAGAAGCAGCTAAGGTGATGCTGAGGGAAAAAAATTTTGATGTAATTTTAATAGATGTTGTATTACCGGGTCAGA
GTGGTTATAGTTTGTGTAGAGAACTAAAAAAGCAAAAAAATACAGCGAATATCCCAATTATTATTTGTTCTAGTAAATCA
GAGAAAATTGATAAACAGTGGGGTATGAAGCAGGGAGCATCTGCTTATGTTACTAAACCAGTTGATCAAGAGAAACTTGT
GGCAACATTAGAAAAATTAGTTGTGTGA

Upstream 100 bases:

>100_bases
AAACTTTTACGATTATATGAAATAATAGTAATCATTAGGAATTACTATTAAGTTAGTTTTGACAGTGGAAAGATAATCAA
TGGTAAAGGGAAGTGTTTTG

Downstream 100 bases:

>100_bases
AAAACATCGTTGTTTAATGACTAAAGCATGAAAAAAAGCCAATGGCAAAACAACTATCATTAAATAGTAGTCAACAATTT
ATATCTTTAGAAGTCACTAA

Product: response regulator receiver protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MVEDSHREATALTQCLKKSGYEVLNVGTAEAAKVMLREKNFDVILIDVVLPGQSGYSLCRELKKQKNTANIPIIICSSKS
EKIDKQWGMKQGASAYVTKPVDQEKLVATLEKLVV

Sequences:

>Translated_115_residues
MVEDSHREATALTQCLKKSGYEVLNVGTAEAAKVMLREKNFDVILIDVVLPGQSGYSLCRELKKQKNTANIPIIICSSKS
EKIDKQWGMKQGASAYVTKPVDQEKLVATLEKLVV
>Mature_115_residues
MVEDSHREATALTQCLKKSGYEVLNVGTAEAAKVMLREKNFDVILIDVVLPGQSGYSLCRELKKQKNTANIPIIICSSKS
EKIDKQWGMKQGASAYVTKPVDQEKLVATLEKLVV

Specific function: May be a part of a signal-transduction system that regulates twitching motility by controlling pilus function (extension and retraction) [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=109, Percent_Identity=33.9449541284404, Blast_Score=82, Evalue=7e-18,
Organism=Escherichia coli, GI1788394, Length=114, Percent_Identity=29.8245614035088, Blast_Score=70, Evalue=4e-14,
Organism=Escherichia coli, GI1786599, Length=96, Percent_Identity=32.2916666666667, Blast_Score=69, Evalue=8e-14,
Organism=Escherichia coli, GI1790863, Length=114, Percent_Identity=28.0701754385965, Blast_Score=65, Evalue=1e-12,
Organism=Escherichia coli, GI1787229, Length=114, Percent_Identity=28.9473684210526, Blast_Score=65, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 12710; Mature: 12710

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEDSHREATALTQCLKKSGYEVLNVGTAEAAKVMLREKNFDVILIDVVLPGQSGYSLCR
CCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHH
ELKKQKNTANIPIIICSSKSEKIDKQWGMKQGASAYVTKPVDQEKLVATLEKLVV
HHHHCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MVEDSHREATALTQCLKKSGYEVLNVGTAEAAKVMLREKNFDVILIDVVLPGQSGYSLCR
CCCCCHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCEEEEEEEECCCCCHHHHH
ELKKQKNTANIPIIICSSKSEKIDKQWGMKQGASAYVTKPVDQEKLVATLEKLVV
HHHHCCCCCCCCEEEECCCCHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7908398; 10984043 [H]