Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
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Accession | NC_008312 |
Length | 7,750,108 |
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The map label for this gene is 113474505
Identifier: 113474505
GI number: 113474505
Start: 1067190
End: 1067384
Strand: Reverse
Name: 113474505
Synonym: Tery_0654
Alternate gene names: NA
Gene position: 1067384-1067190 (Counterclockwise)
Preceding gene: 113474506
Following gene: 113474502
Centisome position: 13.77
GC content: 39.49
Gene sequence:
>195_bases ATGTCTAAAAAACAAGCCCAATTAATCAATTTTTTGAAGTGGGAGCTGTCCATCTCAGAGTCTGCGATCGCTACTGCTTT ACGGCATCAGGAAGAAGGCTGTAATCAATTGCCCATGATACTTTGGCAATATGGTCTCGTAACATTGAAACAATTAGACC AAATATTTGATTGGCTACAAACGGCCAGTGTTTAA
Upstream 100 bases:
>100_bases TACTGAATAGTAATTTATACTATTCATACTAGATGTAGTTATAAGAAAATAATATTTATTTGAGATTTTTTTAAGGTACT ACTGAAAACAACTTTTAATT
Downstream 100 bases:
>100_bases TGAATTGCTTCGCTTAAGCACCATTACACTTATTTTTTCACCTGCAGCATAAAGTATTCAGGGCTGAAAAAGTGTGTAAT TAATTTTGTGTACTTGCTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MSKKQAQLINFLKWELSISESAIATALRHQEEGCNQLPMILWQYGLVTLKQLDQIFDWLQTASV
Sequences:
>Translated_64_residues MSKKQAQLINFLKWELSISESAIATALRHQEEGCNQLPMILWQYGLVTLKQLDQIFDWLQTASV >Mature_63_residues SKKQAQLINFLKWELSISESAIATALRHQEEGCNQLPMILWQYGLVTLKQLDQIFDWLQTASV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7407; Mature: 7275
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKKQAQLINFLKWELSISESAIATALRHQEEGCNQLPMILWQYGLVTLKQLDQIFDWLQ CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TASV HCCC >Mature Secondary Structure SKKQAQLINFLKWELSISESAIATALRHQEEGCNQLPMILWQYGLVTLKQLDQIFDWLQ CHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH TASV HCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA