Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474506

Identifier: 113474506

GI number: 113474506

Start: 1068070

End: 1068591

Strand: Reverse

Name: 113474506

Synonym: Tery_0655

Alternate gene names: NA

Gene position: 1068591-1068070 (Counterclockwise)

Preceding gene: 113474510

Following gene: 113474505

Centisome position: 13.79

GC content: 37.36

Gene sequence:

>522_bases
ATGGTTAGTTATACCTTGGCTCAAAATCCAGATACAATCATAACTGTTAGGGGTAAAGATTCAGACAGGGCCCGTCAAAA
AGCTATGGATAAGCTTGTAGAAATGATGGACTCTGGTGAAATACCAACAGAGTTAGAAAATGGATTTAGTCCGGAACAGT
TTATTGAGGTCAAAGAATCAAAAGAAGTAACCAAAGAGATTATTTCTGAGGAGGAAGATGCTGTTGCTCAAGCAGTACAG
ACGCTTAGTGATTTTGCTGCACTTAAGATTAAAGTTGTAGAATCTCGAGAAGAAGCATTAAAGATTCTGTCTGCAATTGA
GGTACTATTTACAGATGAAACTGTAACAGTTGAGGAAATTGCTAACCTTAGGGATGGTTTTAAGATACTAAAAACTTTTG
CTGTAGCTAATTTACGTTACAGGGAAGCAAGAGATAAAGCACAAAAAGCTCGTGTTATCCTTGATCAAGCATTCAGTTGT
GCGGAGTCAGAATTAAACCATCTTTCTAGATCCAGAAAGTAG

Upstream 100 bases:

>100_bases
CCTATTGGCTACTCCATAAAAATACTTTTTCGGTAAACCCTAATTAATTTTGCTGTATATTAATTATGTTTATACCATTA
CGTTTACATTTAGTCAGATT

Downstream 100 bases:

>100_bases
CTCCCAAACAGATTTTGATTCCCAATTTATTAAATGTCTCTATCTGTAAATATTTACTGTATTAGTCTAGTATAAATTTA
GTAATCAAAAGTGTTGCTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MVSYTLAQNPDTIITVRGKDSDRARQKAMDKLVEMMDSGEIPTELENGFSPEQFIEVKESKEVTKEIISEEEDAVAQAVQ
TLSDFAALKIKVVESREEALKILSAIEVLFTDETVTVEEIANLRDGFKILKTFAVANLRYREARDKAQKARVILDQAFSC
AESELNHLSRSRK

Sequences:

>Translated_173_residues
MVSYTLAQNPDTIITVRGKDSDRARQKAMDKLVEMMDSGEIPTELENGFSPEQFIEVKESKEVTKEIISEEEDAVAQAVQ
TLSDFAALKIKVVESREEALKILSAIEVLFTDETVTVEEIANLRDGFKILKTFAVANLRYREARDKAQKARVILDQAFSC
AESELNHLSRSRK
>Mature_173_residues
MVSYTLAQNPDTIITVRGKDSDRARQKAMDKLVEMMDSGEIPTELENGFSPEQFIEVKESKEVTKEIISEEEDAVAQAVQ
TLSDFAALKIKVVESREEALKILSAIEVLFTDETVTVEEIANLRDGFKILKTFAVANLRYREARDKAQKARVILDQAFSC
AESELNHLSRSRK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19498; Mature: 19498

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVSYTLAQNPDTIITVRGKDSDRARQKAMDKLVEMMDSGEIPTELENGFSPEQFIEVKES
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH
KEVTKEIISEEEDAVAQAVQTLSDFAALKIKVVESREEALKILSAIEVLFTDETVTVEEI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ANLRDGFKILKTFAVANLRYREARDKAQKARVILDQAFSCAESELNHLSRSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVSYTLAQNPDTIITVRGKDSDRARQKAMDKLVEMMDSGEIPTELENGFSPEQFIEVKES
CCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHH
KEVTKEIISEEEDAVAQAVQTLSDFAALKIKVVESREEALKILSAIEVLFTDETVTVEEI
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
ANLRDGFKILKTFAVANLRYREARDKAQKARVILDQAFSCAESELNHLSRSRK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA