| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474391
Identifier: 113474391
GI number: 113474391
Start: 832685
End: 833020
Strand: Direct
Name: 113474391
Synonym: Tery_0527
Alternate gene names: NA
Gene position: 832685-833020 (Clockwise)
Preceding gene: 113474390
Following gene: 113474392
Centisome position: 10.74
GC content: 35.42
Gene sequence:
>336_bases ATGGATATCATCAGTAAATATCAACAAATAATCGAGAAAATAATCGGCGACTATGCTAAGTTGCGCTATTCCTATAGCGA AGTAGAGAGAAGAACGGTTTTCGACCGAGAACAAAAGCATTATTTATTAATGATTTTGGGAGTGGAAGGTCATAAAATGG TTCATGGTTGCATACTTCATTTGGAAATTAGAGATGATAAAATTTGGATTCATCGCGACGGAACTGAAGATGGTATTGCA AGAGAATTGTTAGCAGAAGGAGTTCCCAAGGACAAAATTGTTTTGGGATTTTATACTCCTGAAAAACGCAAGATAACTGA TTTTGCAGTTTGTTAA
Upstream 100 bases:
>100_bases TATTACTAATTATTTCCATATAATATTATATCCTAATAATCCTTTAAAATGGTAATCAAAATTTAGTGGTTTTCTAAAAA TTAGAGGAGGTAATTATCGA
Downstream 100 bases:
>100_bases TTTGATAAATATTTAAAGGAGAAAATTTTATGAGATTTATTAGTCCGAAAACTGACTTTGCTTTTAAAAGAATCTTCGGT TCTAACCGCAGTCAAAAAAT
Product: FdxN element excision controlling factor protein
Products: NA
Alternate protein names: FdxN Element Excision Controlling Factor Protein; XisI Protein-Like Protein; XisI-Like FdxN Element Excision Controlling Factor Protein; FdxN Element Excision Controlling Factor Protein Like; DNA Element Excision Controlling Factor XisI-Like Protein; XisI Protein-Like; FdxN Element Excision Controlling Factor XisI-Like Protein; Excision Controlling Factor Protein XisI Like Protein
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILHLEIRDDKIWIHRDGTEDGIA RELLAEGVPKDKIVLGFYTPEKRKITDFAVC
Sequences:
>Translated_111_residues MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILHLEIRDDKIWIHRDGTEDGIA RELLAEGVPKDKIVLGFYTPEKRKITDFAVC >Mature_111_residues MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILHLEIRDDKIWIHRDGTEDGIA RELLAEGVPKDKIVLGFYTPEKRKITDFAVC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13050; Mature: 13050
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEE LEIRDDKIWIHRDGTEDGIARELLAEGVPKDKIVLGFYTPEKRKITDFAVC EEEECCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC >Mature Secondary Structure MDIISKYQQIIEKIIGDYAKLRYSYSEVERRTVFDREQKHYLLMILGVEGHKMVHGCILH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCEEEEEEEEE LEIRDDKIWIHRDGTEDGIARELLAEGVPKDKIVLGFYTPEKRKITDFAVC EEEECCEEEEEECCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA