Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474390

Identifier: 113474390

GI number: 113474390

Start: 831588

End: 832475

Strand: Direct

Name: 113474390

Synonym: Tery_0526

Alternate gene names: NA

Gene position: 831588-832475 (Clockwise)

Preceding gene: 113474389

Following gene: 113474391

Centisome position: 10.73

GC content: 34.57

Gene sequence:

>888_bases
ATGAAAGTTAATTTTTCGGAAGTGAGCCAACGCCATATCTGCATTGCTCTATTTATATTTTGTTCTCTTTTACAACGTTC
GATTTCTCCTTTATTTTTACTTCCTTTGTTGTTACAAGAAAAACGTAATTTATTGGGACAAATTGCTGAGGTTAAATTTA
ATAACGATAATAATAATTTACAATTTTTACAGCAACACAGTCAACAACTGAATAATTTAGAGCGTCAATTTCAAAAGGGA
CAAAAAACTGTTGATAAACTACAACATAAAGTTCAGACTCAGGACACTCGCCAGAATTTAATTTTATCTAAAAGTAGTAA
GCAAAGTAATCAAATTTGTTTGTTGGAAGATCGGATTAATTCTATTCAGGAAAGGTTTAAGTCGGTGCCTTCAAAGGTTG
TGCCGATTCAACGTCGTACCCTATTGGCAATTGATTCTGCAAATTTGGATGGTGCTGCTAAAAGTTTGAATATGAAGGTT
GATTATGAAAGATTAAAACGCTATGTTAATGTTCATTTTGGTTCTCTGGAAGCTCGAATTTATGTGGGGAAGTATGATAA
TAGTTCTCGGCAGAAATTGTGGTTTAATTACTTAGAAAAAAATGGATATGTGGTGAAGACAAAGCCTGTTACGGTCTATG
GAAATACAGTTAAGGCTAATGTTGATGTGGATTTGGCTTTGGATATTAGGGAGCATGGGGTGAATTTCAAAAATGTGGTT
TTATGTAGTGGGGATGGTGATTATTTGCCACTTGTTGAACAATTACAAGGGTTGGGTATTAAGGTGATAGTTCTTGCTTC
CCCAGGACATACTAACCACTTTTTGCAAAGGCAAGCGGATGAGTATATTAGTTTGATTGATATTATGGGGGAAATTAGCG
ATCGCTAA

Upstream 100 bases:

>100_bases
TCAGAACGGTTGTATAGCTTTTATATTTAGCAAGTGCAACATTTTTTTATTTCCACGGATAGTTTAATTATCATGTGAAG
TTATTAATATTTTTAAAAGT

Downstream 100 bases:

>100_bases
TCAATTATAGGTATAAATAAGTTAGGAAAAAGTAGGGGCAAATCGCAGTTTTACTGGTGGATATTAAACGCCCCTAAATG
AGTCAGAATAGAAGAGGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKVNFSEVSQRHICIALFIFCSLLQRSISPLFLLPLLLQEKRNLLGQIAEVKFNNDNNNLQFLQQHSQQLNNLERQFQKG
QKTVDKLQHKVQTQDTRQNLILSKSSKQSNQICLLEDRINSIQERFKSVPSKVVPIQRRTLLAIDSANLDGAAKSLNMKV
DYERLKRYVNVHFGSLEARIYVGKYDNSSRQKLWFNYLEKNGYVVKTKPVTVYGNTVKANVDVDLALDIREHGVNFKNVV
LCSGDGDYLPLVEQLQGLGIKVIVLASPGHTNHFLQRQADEYISLIDIMGEISDR

Sequences:

>Translated_295_residues
MKVNFSEVSQRHICIALFIFCSLLQRSISPLFLLPLLLQEKRNLLGQIAEVKFNNDNNNLQFLQQHSQQLNNLERQFQKG
QKTVDKLQHKVQTQDTRQNLILSKSSKQSNQICLLEDRINSIQERFKSVPSKVVPIQRRTLLAIDSANLDGAAKSLNMKV
DYERLKRYVNVHFGSLEARIYVGKYDNSSRQKLWFNYLEKNGYVVKTKPVTVYGNTVKANVDVDLALDIREHGVNFKNVV
LCSGDGDYLPLVEQLQGLGIKVIVLASPGHTNHFLQRQADEYISLIDIMGEISDR
>Mature_295_residues
MKVNFSEVSQRHICIALFIFCSLLQRSISPLFLLPLLLQEKRNLLGQIAEVKFNNDNNNLQFLQQHSQQLNNLERQFQKG
QKTVDKLQHKVQTQDTRQNLILSKSSKQSNQICLLEDRINSIQERFKSVPSKVVPIQRRTLLAIDSANLDGAAKSLNMKV
DYERLKRYVNVHFGSLEARIYVGKYDNSSRQKLWFNYLEKNGYVVKTKPVTVYGNTVKANVDVDLALDIREHGVNFKNVV
LCSGDGDYLPLVEQLQGLGIKVIVLASPGHTNHFLQRQADEYISLIDIMGEISDR

Specific function: Unknown

COG id: COG1432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33785; Mature: 33785

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNFSEVSQRHICIALFIFCSLLQRSISPLFLLPLLLQEKRNLLGQIAEVKFNNDNNNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
QFLQQHSQQLNNLERQFQKGQKTVDKLQHKVQTQDTRQNLILSKSSKQSNQICLLEDRIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEHHHHH
SIQERFKSVPSKVVPIQRRTLLAIDSANLDGAAKSLNMKVDYERLKRYVNVHFGSLEARI
HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHCCCEECHHHHHHHHHHEECCEEEEE
YVGKYDNSSRQKLWFNYLEKNGYVVKTKPVTVYGNTVKANVDVDLALDIREHGVNFKNVV
EEEECCCCCHHHHHHHHHHCCCEEEEECCEEEECCEEEEECEEEEEEEHHHHCCCCCEEE
LCSGDGDYLPLVEQLQGLGIKVIVLASPGHTNHFLQRQADEYISLIDIMGEISDR
EECCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKVNFSEVSQRHICIALFIFCSLLQRSISPLFLLPLLLQEKRNLLGQIAEVKFNNDNNNL
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEEEECCCCCHH
QFLQQHSQQLNNLERQFQKGQKTVDKLQHKVQTQDTRQNLILSKSSKQSNQICLLEDRIN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEHHHHH
SIQERFKSVPSKVVPIQRRTLLAIDSANLDGAAKSLNMKVDYERLKRYVNVHFGSLEARI
HHHHHHHHCCCCCCCCCCEEEEEEECCCCCCHHHHCCCEECHHHHHHHHHHEECCEEEEE
YVGKYDNSSRQKLWFNYLEKNGYVVKTKPVTVYGNTVKANVDVDLALDIREHGVNFKNVV
EEEECCCCCHHHHHHHHHHCCCEEEEECCEEEECCEEEEECEEEEEEEHHHHCCCCCEEE
LCSGDGDYLPLVEQLQGLGIKVIVLASPGHTNHFLQRQADEYISLIDIMGEISDR
EECCCCCCCHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA