| Definition | Trichodesmium erythraeum IMS101 chromosome, complete genome. |
|---|---|
| Accession | NC_008312 |
| Length | 7,750,108 |
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The map label for this gene is 113474392
Identifier: 113474392
GI number: 113474392
Start: 833050
End: 833985
Strand: Direct
Name: 113474392
Synonym: Tery_0528
Alternate gene names: NA
Gene position: 833050-833985 (Clockwise)
Preceding gene: 113474391
Following gene: 113474393
Centisome position: 10.75
GC content: 32.48
Gene sequence:
>936_bases ATGAGATTTATTAGTCCGAAAACTGACTTTGCTTTTAAAAGAATCTTCGGTTCTAACCGCAGTCAAAAAATCCTGATTAG TTTTCTCAATGCTATAGTTTATGACAATCAAAATATTATCCAATCTCTAGAAATTATTGACCCCTATAATGCTGGCTATA CTAGCACTATTAAGGATACTTATCTGGATGTGAGAGCTTTATTAGATAATGGTTCAACAGTTATTATTGAGATGCAAGTC TTAAACGTAGAAGGTTTTGAAAAACGAGTAATTTATAATTTGGCAAAAACCTATGGAAGTCAATTAAGTCTAAGAACGGA ACAACCAAGATTACAACCATTTATAACCTTGATAATTACGGATTTTTTGCTATTTCAAGAGAGTGGCAAAATGATTAATA AATTTAGATTTAAAGAAGACACAGAGTTCTTTAATTACCGAGATGAATTAACTTTAATATTTTTGGAACTACCGAAATTT AATAAAGAATTATCTGCTTTAGAAACACTCAGCGATAAATGGATATATTTTCTTAAATCTGCTCCTAGTTTGGAGATAAT ACCCTCTTCATTGGGAGAAGTATCAGAAATAGAAGCAGCATTAAATATCGCTAACCGAGCTGATTTAAATAATCAAGAAC TAGAGGAGTTACATAAACAAGAAATATTTATTGGTGATAGACAAGGAGAGGTGATTTTAGCTAAACAAGAGGGCGTAAAA GAAGGAGAAGAACAAGGGAAAATTCAGCAAGCAATTAAACAAGTATTGCGTCTAGCTCGGCGAATATTGGGGGAAGTTTC ACCGGAAATTCAGGCTCGAATACAACAGCTATCTTTAGAAAAATTAGATTTATTAGCAGAAGAGATATTTGAACTGACTA CTATGGAAAATCTGGTGAATTGGTTAGAGACTGGAACAGAAAGTTTGGAGAAATAG
Upstream 100 bases:
>100_bases CCAAGGACAAAATTGTTTTGGGATTTTATACTCCTGAAAAACGCAAGATAACTGATTTTGCAGTTTGTTAATTTGATAAA TATTTAAAGGAGAAAATTTT
Downstream 100 bases:
>100_bases CTCCAGAAGTTCGGACTCAAATAGAGGGGTTATTTCTAGAAAATTTTAGATTTTTTAGGTGATGATTTTTTTGATTTGAT TTAGCAACTATGTTAGTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 311; Mature: 311
Protein sequence:
>311_residues MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDTYLDVRALLDNGSTVIIEMQV LNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIITDFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKF NKELSALETLSDKWIYFLKSAPSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVNWLETGTESLEK
Sequences:
>Translated_311_residues MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDTYLDVRALLDNGSTVIIEMQV LNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIITDFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKF NKELSALETLSDKWIYFLKSAPSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVNWLETGTESLEK >Mature_311_residues MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDTYLDVRALLDNGSTVIIEMQV LNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIITDFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKF NKELSALETLSDKWIYFLKSAPSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVNWLETGTESLEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35826; Mature: 35826
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDT CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHH YLDVRALLDNGSTVIIEMQVLNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIIT HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH DFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKFNKELSALETLSDKWIYFLKS HHHHHHHCCHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEEEECC APSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK CCCCEECCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCCC EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVN CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLETGTESLEK HHHHHHHHHCC >Mature Secondary Structure MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDT CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHH YLDVRALLDNGSTVIIEMQVLNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIIT HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH DFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKFNKELSALETLSDKWIYFLKS HHHHHHHCCHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEEEECC APSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK CCCCEECCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCCC EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVN CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH WLETGTESLEK HHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA