Definition Trichodesmium erythraeum IMS101 chromosome, complete genome.
Accession NC_008312
Length 7,750,108

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The map label for this gene is 113474392

Identifier: 113474392

GI number: 113474392

Start: 833050

End: 833985

Strand: Direct

Name: 113474392

Synonym: Tery_0528

Alternate gene names: NA

Gene position: 833050-833985 (Clockwise)

Preceding gene: 113474391

Following gene: 113474393

Centisome position: 10.75

GC content: 32.48

Gene sequence:

>936_bases
ATGAGATTTATTAGTCCGAAAACTGACTTTGCTTTTAAAAGAATCTTCGGTTCTAACCGCAGTCAAAAAATCCTGATTAG
TTTTCTCAATGCTATAGTTTATGACAATCAAAATATTATCCAATCTCTAGAAATTATTGACCCCTATAATGCTGGCTATA
CTAGCACTATTAAGGATACTTATCTGGATGTGAGAGCTTTATTAGATAATGGTTCAACAGTTATTATTGAGATGCAAGTC
TTAAACGTAGAAGGTTTTGAAAAACGAGTAATTTATAATTTGGCAAAAACCTATGGAAGTCAATTAAGTCTAAGAACGGA
ACAACCAAGATTACAACCATTTATAACCTTGATAATTACGGATTTTTTGCTATTTCAAGAGAGTGGCAAAATGATTAATA
AATTTAGATTTAAAGAAGACACAGAGTTCTTTAATTACCGAGATGAATTAACTTTAATATTTTTGGAACTACCGAAATTT
AATAAAGAATTATCTGCTTTAGAAACACTCAGCGATAAATGGATATATTTTCTTAAATCTGCTCCTAGTTTGGAGATAAT
ACCCTCTTCATTGGGAGAAGTATCAGAAATAGAAGCAGCATTAAATATCGCTAACCGAGCTGATTTAAATAATCAAGAAC
TAGAGGAGTTACATAAACAAGAAATATTTATTGGTGATAGACAAGGAGAGGTGATTTTAGCTAAACAAGAGGGCGTAAAA
GAAGGAGAAGAACAAGGGAAAATTCAGCAAGCAATTAAACAAGTATTGCGTCTAGCTCGGCGAATATTGGGGGAAGTTTC
ACCGGAAATTCAGGCTCGAATACAACAGCTATCTTTAGAAAAATTAGATTTATTAGCAGAAGAGATATTTGAACTGACTA
CTATGGAAAATCTGGTGAATTGGTTAGAGACTGGAACAGAAAGTTTGGAGAAATAG

Upstream 100 bases:

>100_bases
CCAAGGACAAAATTGTTTTGGGATTTTATACTCCTGAAAAACGCAAGATAACTGATTTTGCAGTTTGTTAATTTGATAAA
TATTTAAAGGAGAAAATTTT

Downstream 100 bases:

>100_bases
CTCCAGAAGTTCGGACTCAAATAGAGGGGTTATTTCTAGAAAATTTTAGATTTTTTAGGTGATGATTTTTTTGATTTGAT
TTAGCAACTATGTTAGTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDTYLDVRALLDNGSTVIIEMQV
LNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIITDFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKF
NKELSALETLSDKWIYFLKSAPSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK
EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVNWLETGTESLEK

Sequences:

>Translated_311_residues
MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDTYLDVRALLDNGSTVIIEMQV
LNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIITDFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKF
NKELSALETLSDKWIYFLKSAPSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK
EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVNWLETGTESLEK
>Mature_311_residues
MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDTYLDVRALLDNGSTVIIEMQV
LNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIITDFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKF
NKELSALETLSDKWIYFLKSAPSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK
EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVNWLETGTESLEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35826; Mature: 35826

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDT
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHH
YLDVRALLDNGSTVIIEMQVLNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIIT
HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
DFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKFNKELSALETLSDKWIYFLKS
HHHHHHHCCHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEEEECC
APSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK
CCCCEECCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCCC
EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVN
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLETGTESLEK
HHHHHHHHHCC
>Mature Secondary Structure
MRFISPKTDFAFKRIFGSNRSQKILISFLNAIVYDNQNIIQSLEIIDPYNAGYTSTIKDT
CCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHH
YLDVRALLDNGSTVIIEMQVLNVEGFEKRVIYNLAKTYGSQLSLRTEQPRLQPFITLIIT
HHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHH
DFLLFQESGKMINKFRFKEDTEFFNYRDELTLIFLELPKFNKELSALETLSDKWIYFLKS
HHHHHHHCCHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHEEEECC
APSLEIIPSSLGEVSEIEAALNIANRADLNNQELEELHKQEIFIGDRQGEVILAKQEGVK
CCCCEECCHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCEEEECCCCCC
EGEEQGKIQQAIKQVLRLARRILGEVSPEIQARIQQLSLEKLDLLAEEIFELTTMENLVN
CCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WLETGTESLEK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA